Acanthopagrus latus (yellowfin seabream): 119025679
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Entry
119025679 CDS
T08233
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04137
Mitophagy - animal
alat04144
Endocytosis
alat04145
Phagosome
alat04148
Efferocytosis
alat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119025679 (rab5b)
04145 Phagosome
119025679 (rab5b)
04137 Mitophagy - animal
119025679 (rab5b)
04148 Efferocytosis
119025679 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119025679 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119025679 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119025679 (rab5b)
04031 GTP-binding proteins [BR:
alat04031
]
119025679 (rab5b)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
119025679 (rab5b)
Endosome - Lysosome transport
119025679 (rab5b)
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119025679 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
119025679 (rab5b)
Exosomal proteins of colorectal cancer cells
119025679 (rab5b)
Exosomal proteins of melanoma cells
119025679 (rab5b)
GTP-binding proteins [BR:
alat04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
119025679 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
B12-binding
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
119025679
NCBI-ProteinID:
XP_036965382
LinkDB
All DBs
Position
9:complement(2657323..2664620)
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALSGNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgctccaacggcacactaccacagaccaagatctgc
cagttcaagttggtgctgctgggtgacatggctgtgggcaagtccagcctggtgctgcgc
ttcgtcaagggacagttcgatgagttccaggagacaaccataggagctgcattcctggct
cagtcggtgtgtctagatgataccacagtgaagtttgagatctgggacactgcagggcaa
gagcgataccatagcctggctcccatgtactaccgtggtgctcaggctgccatcgttgtt
tttgacatcaccaagccggaaacctttgagcgagccaaagcctgggtgaaggagctacag
aggcaggccagtcctaacattgttattgccctgtctgggaacaaggctgacctggcagag
aggagactagtagagtatgaggaagcccagacatatgctgaagacactggcttactcttt
atggagacctctgccaagacagccatgaatgtcaatgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccaaaacccaactcatgcagctcgacatcggggagtcaac
cttcaggaccctgatgcccactctaccagagcctgctgtggtggaaactag
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