KEGG   Acanthopagrus latus (yellowfin seabream): 119025825
Entry
119025825         CDS       T08233                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04382  Cornified envelope formation
alat04510  Focal adhesion
alat04512  ECM-receptor interaction
alat04518  Integrin signaling
alat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119025825 (col4a2)
   04518 Integrin signaling
    119025825 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119025825 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119025825 (col4a2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119025825 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alat04147]
    119025825 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:alat00536]
    119025825 (col4a2)
Exosome [BR:alat04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   119025825 (col4a2)
Glycosaminoglycan binding proteins [BR:alat00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   119025825 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 119025825
NCBI-ProteinID: XP_036965672
LinkDB
Position
9
AA seq 1678 aa
MSGTMQGQHDTRLSSLRLLLLLCVSIAILAPGVHGGGKKHSGPCGGRDCSGGCQCFPEKG
ARGQPGPLGPQGHQGPPGRAGDPGIQGPKGQKGDHGRSGIVGPKGNIGMTGVPGFSGNDG
IPGHPGQAGSRGKPGADGCNGTQGDAGLPGQTGYNGSPGPPGQPGRKGAKGDSLELSVYM
ERFRGDQGTPGVNGIFGPPGNPGWQGNRGIPGPKGPTGPPGPRGPKGTMTKVLKGLKGEQ
GDIGPPGPPGNSTHQHTLPPYGPSGPRGEKGLKGEIGDRADNKGETGIMGFPGLRGESGL
DGSPGERGDPGDRGPKGRDGIKGVRGDAGLLISSGPSWPWSSTAGPPGPPGEQGPVGERG
PVGDQGIPGPPGRPASDNGQQVWQLFGPFGFKGEAGEKGQQGDPGRPAVSAGPPGTSGRP
GGRGPPGPKGTWAEYFKGAPGGRGRPGNAGYKGVKGDHGECECSVVNSPPGQPGPAGEPG
DAGMIGEFGQEGDVGDPGPRGEDGFPGPAGLSGVPGPKGQKGPETMATQKGYSGDPGVPG
PNGRPGVPGAPGQDGLPGFPGSRGLPGEAPSRLRGDKGFPGLPGRPGVAGQAGEPGEGLK
GIKGQRGLPGDDGITGYEGVPGTPGSPGGCSPRGDGEQVDVTGSCDPIPGPPGLPGAPGL
TGLPGFPGPRGEKGVQGPLGETGEKGETGEQGIGGRPGPPGFAGPRGNLGNPGRKGSVGV
PGFPGVSGRHGSQGEKGVHGEILGASPGSPGDPGPPGFRGEKGQTGEPGKPGYPGMSGMP
GMIGFKGEKGPAGLQGEEGRPGPAGRYGYPGDPGRAGPPGPPGATGQPGLTGERGTEGDP
GPPGPIGLKGVPGTYGADGATGEYGPSGDPGLPGADGRPGLPGMKGYKGSPGMEGFEGMR
GDEGVKGFSGLRGEPGVFGEVGPKGVTGHQGPKGDRGLRGPPGDKPHIPAQIIVDMKGAK
GDLGYPGTKGFTGPRGSKGLPGVPGSGGYHGLPGDPSNVKGVQGDPGPQGLPGLKGMPGL
TGNKGISGFDGMTGKTGIKGSPGAYGASGDKGRKGIKGERGPRIDLPGVPGLRGELGFSG
DPGQKGLLGNPGDRGTLGSDGIEGRKGVSGEPGIPGNTGTDGQKGSPGSQGPKGFPGEPG
KQGLPGFPGFRGEKGFPGLKGLYGLHGLKGQKGVQGKPGLDITGPAGESGPKGEKGEGGD
PNNQPGDPGIAGLKGFQGSPGDRGQSGTPGLRGPRGPDGKPDKPGSRGDPGFVGAKGYEG
FPGARGYPGADAPPGEKGIPGGSGFPGFPGMKGNKGDQGVLGSRGQNGVSGKKGVKGEQG
FMGFPGVTGAKGERGPAGPKGSTGPPGFRGVPGNQGPPPIPIKILGERGPSGPRGIQGPQ
GIRGGIGPHGPPGDGGFMGPAGQKGMPGISGRPGVPGFRGSDGPRGHPGLQGREGLRGNT
GVPGLPGMPGRSVSVGYLLVKHSQTEQTPMCPVGMSKLWDGYSLLYLEGQEKAHNQDLGL
AGSCLPRFSTMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPVEEGEIKPYISRCSVC
EAPSVAIAIHSQDITIPQCPVGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTT
PFIECNGAKGTCHYFANKHSFWLTSIDQSFHTEPSSETLKAGQLLSRISRCQVCMKNL
NT seq 5037 nt   +upstreamnt  +downstreamnt
atgagcgggaccatgcaaggacaacacgacacaagactgagcagtctgaggctgctgctg
ctcctgtgcgtctccatcgccatcctcgccccaggagtgcacgggggcgggaagaaacac
agtggcccctgcggaggaagagactgcagcggaggatgtcagtgtttcccagagaagggt
gccaggggtcaacctgggcctcttggtcctcagggccatcaaggacccccagggagagca
ggtgatccaggcatccaagggccaaaggggcagaagggtgaccatggccgtagtggtatc
gtgggtcctaaaggaaatataggaatgacgggcgtacctggattttctggaaatgatggc
attcctggtcacccgggacaagctgggtccagggggaagccaggtgctgacggctgtaac
gggacacagggagacgcagggctaccggggcaaaccggctacaacggctcacctggtcct
cctggacaacccggaaggaagggagccaagggagactctctggagctgagtgtgtacatg
gagcgtttcaggggagatcaaggcactccaggggtcaacggaatatttgggccgccaggg
aatcccggatggcagggtaacagaggcatcccagggccaaagggtcccacaggccctcca
ggtcctcgtggaccaaagggcaccatgaccaaagtgctgaaagggctcaaaggagaacaa
ggggacatcggaccaccggggccaccaggaaactcaacacatcagcatacgctgcccccc
tacggaccttcggggcctcgtggggagaaaggcttgaaaggagaaataggagatcgggct
gacaacaaaggagaaactggtataatgggatttcctggacttcggggtgaatctggtcta
gatgggagtcctggagagaggggggaccccggtgatcgaggtccaaaaggcagagatgga
atcaagggagtcagaggtgacgcaggactgctgatttcatcaggccccagttggccttgg
tcttcaacagctggtcctcctggtcctcctggtgagcagggtccagtgggcgagaggggc
ccagttggagaccaaggcatccccggacccccgggacgcccggcctccgacaatgggcaa
caagtgtggcaattattcgggccatttggatttaagggggaggcgggagagaagggccaa
caaggggatccaggacgccctgctgtcagtgcaggacccccaggcaccagcggtcgccca
gggggcaggggccctccaggacccaaaggaacatgggctgagtacttcaagggggccccc
ggtgggagaggaaggcccggcaatgcaggctataaaggagtgaaaggagatcacggggaa
tgtgaatgctctgttgtgaactctcccccggggcaacctggtcctgctggtgaacctggt
gacgctgggatgattggagagtttggtcaggagggtgacgtaggagacccaggcccccgt
ggagaagacggattccctggacctgctggactcagtggtgtgccaggcccaaaaggtcaa
aaagggccagagactatggccacacagaaaggatattctggagacccaggggttcctggg
ccaaatggacggccgggtgtaccgggtgctccaggccaagatggtttgcctggtttccca
gggagccgaggtcttccaggagaggctcctagcagactacgtggagacaaaggtttccca
ggtctgcctggtcgacccggtgtggccgggcaagcaggagaaccaggcgaaggcctcaag
ggcatcaaaggccaacgtggtttgcctggtgatgatggcatcacaggttatgaaggagtt
ccaggaacacctggcagcccaggcggctgtagtccaagaggagatggggaacaggtggat
gtaacaggttcttgtgatcctattccaggacctccagggctgcctggagctccaggactc
actgggctaccaggttttccaggtcctcggggagaaaaaggagtccagggtccacttgga
gagactggtgagaaaggcgaaacaggagaacaaggcataggaggccgccctggaccacca
ggttttgccggacctcgtggaaacttggggaatcctggccggaaaggttcagtaggggtc
cctggatttcctggtgtgtctggcagacacgggtcacaaggtgaaaagggtgttcatgga
gagatcctgggagcatctccaggatccccaggtgacccggggccgcctgggtttcgagga
gaaaaaggccagactggtgaaccaggaaaaccaggctatccaggaatgtctggcatgcct
ggaatgataggcttcaagggtgagaagggccctgcaggcctgcagggggaggaaggtagg
cctgggccagcaggcagatatggctaccctggtgatcctgggagagcaggtccacctggg
ccacctggtgctactggacagccaggattaactggagagaggggaactgaaggagaccca
ggccctccaggtccaataggattaaaaggcgtcccagggacgtatggtgctgatggtgcc
actggagagtatggcccatcaggtgacccaggattgcctggtgctgatgggcggccagga
cttcctggaatgaaaggatacaaagggtctcctggcatggaaggctttgaggggatgagg
ggtgacgaaggagtgaagggcttcagcgggcttagaggagaacctggagtctttggtgaa
gttggccctaaaggagtgacaggtcatcaggggccaaaaggtgatcgaggtttgagaggg
ccacctggggacaagccgcacatcccagcccagataattgttgacatgaagggagccaag
ggagaccttggatatccaggaactaaaggtttcaccgggccgagaggttctaagggttta
cctggtgtgccgggctccgggggatatcatggtcttcctggagaccccagcaatgtgaaa
ggtgtccaaggagatcctggtccacaggggctgccagggttgaaaggaatgccaggccta
actggaaataaaggaatttctggttttgatggaatgactggcaaaacgggaattaaagga
agtcccggagcatatggtgcgtcaggagacaaaggaagaaagggcatcaaaggagagaga
ggccctcgtatagatcttccaggagttcctggattgagaggagagcttggtttttcagga
gacccaggccagaaaggattgcttggaaaccctggggacaggggcacacttggttctgat
ggcatcgaaggtagaaagggagtgtcaggtgaaccaggaataccaggaaacacaggcaca
gatggacagaagggatcccctggtagccaaggtccaaaaggttttccaggagaacccgga
aaacaaggacttccgggcttccctggtttcagaggagaaaaaggtttccctggcctgaag
ggtctttatggactacatggactgaagggacaaaagggtgtccagggaaaaccaggtctg
gatatcactggaccagctggggaatcagggcccaaaggagagaagggagaaggcggcgac
cccaacaaccaaccaggtgatcctggcatagccggtcttaaaggcttccaaggatctcca
ggtgaccgtggtcaaagtggaactccaggactccgtggcccccgtggaccagatgggaaa
ccagacaagccaggatccaggggggaccctggctttgttggagctaaagggtatgaaggt
ttccctggagccagagggtatcctggtgccgatgccccccctggagaaaagggtatacca
ggaggaagtgggtttcctggattccccggaatgaaagggaacaaaggagatcaaggggtg
ttaggatcaagggggcaaaatggtgtttctgggaagaaaggggtgaaaggagagcaagga
ttcatgggatttcctggtgtgactggtgcgaagggagaacgaggaccagctggtcccaaa
gggagcactggacctccaggttttcgtggggtcccaggcaaccagggtcctcctccaatt
cccatcaaaattctaggagagaggggcccttcaggaccacggggtatccaaggaccacag
gggattagagggggaatagggccacatgggcctcctggggatggaggtttcatgggaccc
gccggacagaagggcatgcctggcatttctggtagaccaggggtgcctggattccgtggt
agtgatggaccaaggggccatcctggtctgcaaggcagggaaggcctccgtggtaacact
ggtgtccctgggttgcctggtatgccgggccgcagcgtcagcgtgggttacctactggtg
aaacacagtcagacggagcagacgcccatgtgtcctgtgggcatgtctaaactatgggac
gggtacagtcttctgtaccttgagggccaggaaaaggcacacaaccaggatctgggtctg
gccggctcctgcctcccacggttcagcaccatgcccttcctgtactgtaaccctggagac
ctttgttactatgccagtaggaatgataagtcctactggttgtcgacgaccgctcctctt
cctatgatgcccgtagaagagggagaaatcaaaccgtacatcagccgctgctcagtgtgc
gaggctccatcagttgccatcgcaatccacagccaggacatcaccatcccacagtgtccc
gtgggctggcgcagcctgtggatcggctactccttcctcatgcacacagcagcaggaaat
gaaggcggaggtcagtccctgtcgtcgcccggctcctgcctggaggacttccgcacaaca
ccgttcattgagtgtaacggggccaaaggcacatgccactactttgcaaacaagcacagc
ttctggctaacctccatagatcagtcgttccacactgagccctcatcagagacgctcaaa
gcgggccagctcctgtcacgcatcagccgctgccaggtctgcatgaagaacttgtga

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