Acanthopagrus latus (yellowfin seabream): 119025859
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Entry
119025859 CDS
T08233
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119025859 (pcdh8)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119025859 (pcdh8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
119025859
NCBI-ProteinID:
XP_036965759
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All DBs
Position
9:13372024..13376245
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AA seq
970 aa
AA seq
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MGFCTSAGVAGLCVTLLALLHAARCTTTRYVTYEEDAPGTEIGNLSQDLKIDPADDPDTS
FRFMQENNSSVIEMRETDGLLSVAEPIDREQLCPRSPRCFVSFDIVAHSKEKFQLIHVEI
EVRDINDHSPHFARNETSLEIVENLPLDSRFPLQIALDQDVGENYIQSYNISPSAHFAVE
VRDREDGVKFAELVLVRELDREVEDAYTIEVTATDGGGKSGSMLVNIRVLDFNDNSPTFE
HSALKVELNEDSPVGHRVLRVHAFDPDDGVNGEVVYAFADGLSPDVARLFHIDPYSGDVT
LKALVDFEKRRSYELSVKASDLGANSVPSGCKVVIDVVDVNDNAPEISIKPMTSSSDGVA
YITEAAAAESFVALISTSDRDSGSNGYVRVSLLGHEHFTLQQAYGDSFMIITSTALDRER
IPEYNLTVVAEDLGAPPFKTVRQYTIRVTDENDNPPLFSKPLYEVSVLENNIPGSYVTTV
VARDPDVGKNAKVSYKVIDSEVPGGSPVSTYVSVDSLSGSLYTLRSFDYETLQHIDLVIQ
AEDRGSPSLSSTSTIRIRVVDQNDNCPYFTFPVLVNDSADIPLPFNAPAGYLALRVSAED
EDEGLNAELSYQIVQGDPMIFAINKDTGEIAVKQKLTAEIGDVLEMKIAVSDSGRSPLSS
SATVRFVITETEPSEDQVVIVLRSSEEGGSGLDGSLIVIIMLGGGCALLLIAIVVVVVTC
KLSRGGRSRGSKRDVCHSLFDSGPVAMLGSTEPNIYTGQRGFFHQRTSSLDDSCLYEERS
GDSEAKMFLPSKHFQATSVWQGDKYCLQVSGIGNTDQLSVKDSGKGDSDFNDSDSDVSGD
GGKRSFTTFHPRLKSSSSTANSLSSDCQATYCAVAPQSFRAPRDNAYTIGFSPAPVFSSP
HGYHHSWKDSGYGTNRPKSRSGMQSFSRTGTLPSYFPQQQREAAVGGAEIHKQSPNIVTV
ATALEVATMF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgcacttctgcaggagttgctggactgtgcgttacgctgctcgctttactg
cacgccgctcggtgcacaaccacgaggtacgtcacctacgaggaggacgcacccgggacg
gagattgggaatttgtcccaggatttaaagatcgatccggccgatgaccccgacacctcg
ttccgcttcatgcaggaaaacaactcctccgtgattgagatgagggagaccgacgggctg
ctgagcgtcgcggagcccatcgaccgggagcagctgtgccccaggtccccgcgctgcttc
gtcagcttcgacatcgtggcccactccaaggagaagttccagctcatccacgtggagatc
gaggtgagggacatcaacgaccactctccccacttcgcgcgcaacgagacgagtttggag
atcgtggagaacctcccgctggactccaggttcccgctgcagatcgccctcgaccaggac
gtgggggagaactacatccagagctacaacatctccccgtccgctcacttcgccgtggag
gtgcgcgaccgggaggacggggtgaagtttgcggagctggtgctggtgagggagctggac
agggaggtggaggacgcctacaccatcgaggtgacagcgaccgacggggggggaaagtcc
ggctcgatgctggtaaacatcagggtgctggactttaacgacaacagcccgacgttcgag
cacagcgccctgaaagttgagctgaacgaggactcccccgtgggtcacagggtgctcagg
gtgcacgcgtttgacccggatgacggcgtcaacggcgaggtggtgtacgcgttcgcggac
gggctctccccggacgtcgcacgcctcttccacatcgacccgtattccggggacgtgacc
ttgaaggcgctggtggactttgagaaaaggaggtcgtacgagctgagcgtcaaagcgtcg
gacctgggcgccaactccgtcccgtccggctgcaaagttgtgatagacgtggtggacgtg
aacgacaacgcgccggagatcagcatcaagccgatgacctccagcagcgacggggtcgcc
tacatcacggaggctgcggccgcggagagcttcgtggctctgatcagcacctcggacaga
gactcgggctccaacgggtacgtgcgcgtcagcctgctcgggcacgagcacttcaccctg
cagcaagcctatggcgactctttcatgattataaccagcaccgctttagacagagagagg
atccctgagtataacctcacagtggtggctgaagatttgggagcccccccttttaaaaca
gtcaggcagtacaccatccgtgtgacggatgagaacgacaaccccccgctcttcagcaag
cccctgtatgaagtttcagtgctggagaataatataccgggctcatatgtcaccactgtt
gtggcccgagacccagatgtggggaaaaatgccaaagtttcttataaagtcatagactca
gaggtgccaggggggtctccggtgtccacttatgtctccgtggattcactctcaggctct
ctgtacactttgaggtcttttgactacgagaccctgcagcacatcgacctggtgatccag
gctgaagacagaggctccccctccctctcaagcacctccaccatcaggatcagagtcgtg
gatcagaatgacaactgtccctacttcaccttccccgtcctggtcaacgactccgctgac
atccccctgcctttcaacgcgcctgctggctacctggccctgagagtctcggccgaggac
gaggacgagggattgaacgccgagctctcctatcaaatcgtgcagggcgaccccatgatc
ttcgcgatcaacaaagacacgggagagatcgccgtgaaacaaaagctgacggctgaaatt
ggcgacgtgctggaaatgaaaatcgccgtgagtgacagtggcaggtccccgctctccagc
agtgccaccgttaggtttgtgatcacagagacggagccgtctgaggaccaggtcgtcatt
gtgctgcggtcgagcgaggagggaggctcgggcctggatggctcgctaattgtcatcatc
atgctcggaggggggtgcgcgttgttgctgattgcaatcgtggtggttgtcgtcacatgc
aagctcagccgcggggggagaagccgtggctccaagagggacgtgtgccacagcctgttc
gacagcgggcccgtggccatgctgggctcaacagaacccaacatatacaccggccagaga
ggcttcttccaccagagaacctcctccttggatgactcctgcctgtacgaggagaggagc
ggggactctgaggcaaagatgttcctgccctcgaagcatttccaagcaacatctgtgtgg
caaggcgacaaatactgcttgcaagtgagtggcattgggaacactgaccagctgagcgtg
aaggacagtggcaaaggggacagcgacttcaacgacagcgactctgatgtcagcggcgac
ggaggcaagaggagttttacgaccttccacccgaggctaaagagttcatccagcaccgct
aacagcttatcttcggactgccaggccacctactgtgcggtggcaccgcagagcttcagg
gcccccagagataatgcgtacacaataggcttctccccagcgccggtcttcagcagtcct
catgggtatcaccactcctggaaggattctggctacggcaccaatcgcccgaaatcaagg
agcggcatgcagagcttctccaggacgggcaccctcccttcttacttcccccagcagcag
cgtgaggctgctgttggaggagccgagatccacaagcagagtcccaatattgtaactgtg
gccacggcattagaggtcgcgaccatgttttag
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