Acanthopagrus latus (yellowfin seabream): 119026073
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Entry
119026073 CDS
T08233
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119026073
Membrane trafficking [BR:
alat04131
]
Protein recycling
Others
Others
119026073
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
119026073
NCBI-ProteinID:
XP_036966071
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Position
1:29330951..29514129
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AA seq
1253 aa
AA seq
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MEREVISCPKWHRALWFLLFNMLFLSHAAQAEITCRSCHLGNKWGARELLPNFKFREAAT
ELRGEVFGYGDGPGRSGAASAESRRLRCAGGSAERGPERAGCTEPRLKRNTDSRLHAKGE
FSESEFAKVKVSRVKTNGQRKTRDGAGGPSATRYAKRAKRSSNDDESRPAGSAQSQDPGV
GTIPAAGRRVMRSELRWSGDERRAAGPRQEELKLNSSTFALTGDSSHNQAMVHWSGQNSS
VILMLTKLFDFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIMLL
TDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRW
QVVHERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANKGKPFPGYI
DPNSLVVQDEYVFVQVSTAGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVAA
VQEWNQNETYNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANRKTD
NQVKTYITYNRGRDWRLLQAPGKDLRANSIHCELPYCSLHLHLHVSANPYTSGNIASRES
APGIIVASGSIGSELTTSNVSVFITSDAGNTWRQIFNEEYAVLYLDQGGALVAIRHTPLP
IRHLWLSFDEGRQWNKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFR
SIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVSMTSGPCECTE
ADFECDYGYERRTNGKCTPAFWFHPSSMSRSCTMGMTFLNSTGYRKVVSNNCTAGVSMEY
TARRQQCPIQAPRGLHLVTSEGTLTATLGTNVTFLVFLEEGDGARTSITLDFGDGHAVTY
SNVSSIEDGIKHIYKTVGIYRVTATGENSLGSETTMLYLHVTCQLEYIHLSAPFVAVRNK
EVNLTAVLWPSQVGTVTYIWWIGNNTEQPVITLEGSVSCTFPREGISTVTVQVSVGNSIL
QDRKTIAVHEYFRSHLLAFSSNLDDHNPDVAEWRLDVSRVIRNSLIQATGVREDQLLVTV
LPGLPTAAEFFLLPDKQLTEGKPDKSSVHLDQLSEVLLGALNQNLVQFTLRPGVQVTVYA
AHLSAAPLVDTSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEM
MSPANPTEAPSSSQRDLVHSLEILDTEFNSRPIGCVKPHVHVKFSTELPTYIV
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggagagggaggtcatatcttgtccgaagtggcaccgtgcgctttggtttctgcttttc
aacatgcttttcctctcccacgccgctcaagctgagataacttgcaggtcgtgccacctg
ggaaataagtggggtgcacgggaattactgccgaattttaaatttcgcgaagctgccacg
gaattaaggggagaagtttttggatacggagacgggccggggagatccggggccgcgagt
gccgaaagtcggaggctccgttgcgcaggaggctccgctgaacgcggtccagagcgcgca
ggatgcacggagccgaggctgaaaaggaatacagacagccggctgcacgcaaagggcgaa
tttagtgagagcgagtttgcgaaggtaaaagtttctcgcgtcaaaacgaatggccagcgg
aagacccgcgacggcgcaggtggaccctccgccacccggtacgcaaagcgcgccaaaagg
agcagtaatgatgatgaatccagacccgccggctcggcccagagtcaggacccgggagtg
ggcacgatcccggcggccgggcgcagagtgatgcgctctgaattgcgctggagcggagac
gagaggagagccgccggtccaaggcaggaggagctaaaacttaacagttcaacgttcgct
ttgaccggggattcatctcacaaccaggctatggtgcactggtccggccagaacagcagt
gtgattctgatgctgaccaaactatttgacttcaacctcaacagcgtgactgaaagttca
ttatggaggtcaactgactacggagcaacgtaccagaagctgaatgacaaagtaggagca
aagacaatactcagctatctgtatgtgagccctaacaacaagagaaagatcatgctgcta
actgatccagaggtggagagcagtctgcttatcagctctgatgaaggagccacctaccag
aagtacagactgaatttctacatcctcagcttgctcttccaccctgagcaggaggactgg
attctggcctacagccatgaccaaaagctctacagctcggtggagtttgggaggagatgg
caagtcgtgcatgaaagagtggctcccaatcgtttctactggtcgaaaatgggtttggac
aaagagccgggcctaattcacctggaaaccagcatctctgaaggacaggcgctgtatgtc
acctgcaagctgcagaactgcacagatgccaacaagggcaaaccattccccggctacatt
gaccccaattctctggtggtgcaagatgagtatgtttttgtccaggtgtcaacggcaggg
aggccaatctactatgtgtctgctaaaagagatgtcttcacacccatgaagctgcccaag
tacactctgcctaaggacttgcatgtgatcagtacagatgaaaaccgcgtggttgcagct
gtgcaggagtggaaccagaatgaaacctacaacctgtacgtgtcggacacatcgggggtc
tactacacactggctctggagaacgtggtcagcagtatgggcccagagggcaacgtaatg
gtcgacctctatgaggtggcgggaataaaggggatgttcctagccaacaggaaaacggac
aaccaagtgaagacgtacatcacctacaacagaggcagagactggaggctactgcaggcc
ccgggcaaagacctgagggccaacagtatccactgtgagctaccatactgttcgttacat
ctccatctccatgtgtctgcaaatccctacacatctggaaacatagccagcagggagtca
gcgccggggatcattgtcgcatcaggctccattggctcagagctgaccaccagcaacgtc
agcgtgtttatcacctcggatgcaggaaacacatggcgacagatcttcaatgaggagtac
gcagtgctgtatctcgaccaaggaggcgcgttagtcgcaataagacacacgccgcttccc
atccggcacctgtggttgagcttcgatgaaggacgacagtggaacaagtacagtttcacc
agctctcctctgtttgtggacggggtgctgggagagcccggggaggagacgctcatcatg
acgatattcggccacgtcagtcatcgctcggagtggcagctggtaaaaatagacttcagg
tccatcttcaacaggaggtgtacggaggcggattatcagacgtggcacctacacaaccag
ggagagccgtgcctcatgggggtgaaaagaatctacagaaagctgaagcccacatccagg
tgtgttatgggaaagacatactctgtgtccatgacgtcgggcccctgtgaatgcacggag
gctgattttgaatgtgattacggctatgagagacggacgaatggcaagtgcacccccgcc
ttttggttccatccatcatcgatgtccaggagttgcaccatggggatgacattccttaac
agcactggctacagaaaagtggtgtctaataactgtacagctggagtcagcatggagtac
acagccagaaggcagcagtgtcccatccaagcacccagaggtctccacctggtcaccagc
gagggcacgctgacagctacactgggaaccaatgtcaccttccttgtttttcttgaggag
ggcgacggggcgaggacgagcatcacgctggactttggcgacggccatgctgtgacctac
tccaacgtgagctccattgaggacgggatcaaacacatctacaaaaccgtggggatctac
cgggtgaccgccaccggggagaacagcctcggctctgagactaccatgctctacctgcat
gtaacatgtcagctggagtatatccatctctcagctccctttgtggcggtgaggaataag
gaagtgaacctgactgctgttctgtggcccagccaagtgggaacggtcacctacatatgg
tggattggaaacaacaccgagcagccagtaatcaccctagagggaagtgtgtcatgcacg
ttcccccgggaaggcatcagtacagttactgtgcaggtgtctgtagggaattccattctg
caggacaggaaaaccatcgccgtccacgaatatttccggtcacatctgcttgccttttca
tccaacctggacgaccacaaccctgatgttgccgaatggaggctggatgtgagccgagtc
atcaggaactctctgatccaggccacaggtgtgagagaggatcagcttctggtcaccgtc
ctcccaggattacccaccgcagcagagtttttcctcctccccgacaagcagttaactgag
gggaaaccagacaagagctccgttcatttagatcagctctccgaggttctgcttggcgcc
ttaaatcaaaaccttgtccagttcacgttgcggccaggggtccaagtcaccgtgtatgca
gcgcacctgtcagcagcacccctagtggacacaagcgaaaaccacagtggctctgccatg
ctaatgctgctatcggtagtggttgtgggtttagctgtgtttgtcatctacaaattcaag
aggaagatcccaggcctcaacgtctatgcgcagatgcagaacgaaaaagaacaagaaatg
atgagtccagctaatccaacagaggccccgtccagctcgcagcgggacttggtgcattct
ttggagattctggacacagagtttaactcacggcccatcggatgtgtaaaacctcatgta
catgtgaaattctccacagaactccccacgtacatcgtctaa
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