Acanthopagrus latus (yellowfin seabream): 119026161
Help
Entry
119026161 CDS
T08233
Symbol
rnf17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119026161 (rnf17)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119026161 (rnf17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf_RING_Vps8
zf-RING_Vps41
zf-C3HC4_4
zf-UDP
zf-C3HC4_2
zf-RING_2
Prok-RING_4
TRAF3_RING
PH_CERLI1
Motif
Other DBs
NCBI-GeneID:
119026161
NCBI-ProteinID:
XP_036966215
LinkDB
All DBs
Position
9:complement(5998090..6030336)
Genome browser
AA seq
1596 aa
AA seq
DB search
MLMMERGENSSAVICKLCGDPFSLPEEDEVDSNLPRVLSCGHIYCTSCLMSIQYDSVIRC
PECEVESSIPKGGVYGLQEDSRIIGLIYTAKMNKMKSLRIERSRNRKRNKLPTSTDRNAN
TVDMDQPAAIEKIEQTVDEALAQAAENLAQLEHIHETLTTGLAEQVKRERARLGMEVMQA
TDKALHAVQKWKEAQINQLTKLEARFSTTQVQVCCVQGRIKSLNIAMQMAREVRRVPILG
QYCTLDKVLETLQDPVDIQSFDTKCLTLDSGISCVFHSESLNQGLSLSLKMEHSDPKCFS
ESLPKGHQPGNFPRISPRQYSEGRHGSCTPPTGRKLPTPHKQDKESPGLSSRGSSPYPRP
RHRSSLSRHSSASDLGTPDVIIEELFDERQEHALPPTGPELANDKWRIQRRRKSLFDNRR
NVIQWVAVTHVVNPSHFYVRYVAEKREHEVLSKRINSFVRRDNCHFTSNDTVETGSVVFV
KWKAELWCRANVVEVVQNECVEAVKSCPVYQLASIRVFLPDYGLTKIITIQSEERITESS
LKEVNNHLRKVNEEMNMELGHFAPQAIRCSLKDLVPYDLAKGWSEEAQVEFQNMVGSAAV
EMRPLGQDREYLLVDLRKAPMDQSSDVPISVREFLVFIEVARFYSPVTLGRKPLQYYPPV
YPKMNTELNAVVSHINNPADFYIQMVDNMESMLLSAKLQDCYNATVAGGDDLRVYCPVIG
QAYVARYDDKLWYRAQVIGHPGGRKVEVRYVDFGNKDILSVSNLRKIKDEFFALPSMAIH
CCLSDVVPLNGETWSDACTKRFISLADQKLVTIVATGKVRKTEPLPIKLFESSLNGPVAS
IAELLVKEELVHFKEGVKSKGATFPGEDSDIWDTPLELDSVLEGGDAKQKVVRELNEELL
EIQPLLKLPAKLKDLKVKVSHVNSPSSFYVQLTQNNPQFKRICERVKQECALMEPKDVVW
KADMYCAALITGAWERGQICSDVTSSNIAEVMRCDHGNTVKLHISNLRPLPPSLIGSFAL
ECTLTDIRPAGGRSSWTATACDIFSFYLTGASAVMTIKELTDERPVPVILFCSNKMGQYV
SIADFLVSEGLALRERKPREAVTGKPKETDVQSPVSEAQTDVSDADQKNTSAIPLPSLTP
LASTTNPPKPAPRTIMSAEMVKTQLYQPPELPCLGHIQLSVSAIGEDGLIYVRTQNADCQ
LEQLRERINQSMKTLPRQKPYTWKSVLGCAVIGPDMFWYRGQLLEVQGGHVKVQYVDYGL
VENIPVVHVYPKLLFEDVPQLCMPCQLHGLNPVGGKWQGDAVFLLREILLNRCVDIQVME
LPTDPRGPLTVELFLDGLSLSRILCHYEHASLNLTVSAQKEGHSVMSPAFLDDWDIDTEG
LRGPEEPMLGPFIAPKLPQKGQQFEVRVKHLLTPKELFLWPVEGAAEMEVDGLTLAEALD
RINANISSLPQLTNFPYGSPCLAEYSDGQYYRAKLIKFTSVEPVKILVRHVDFGSDDTLP
PSKIRQMPAELLRFPARALKVKVAGFKAPSVNREKDVLPYSPAWSVKAAREMIELLHNNI
TASVVAREPELTVLLYDENGELVHLPLVSSGLAELD
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgatggaaagaggcgaaaactccagcgctgtaatttgcaaattatgtggagac
ccattctctctgcctgaggaggatgaagttgacagcaacctgcctcgtgtgctctcatgt
ggccacatctactgcacatcttgcctgatgtccattcagtatgacagtgtcattagatgt
ccggagtgtgaggttgagtcaagcattcctaaaggtggggtgtatgggctgcaggaggac
agcagaatcattggcctcatctacactgctaaaatgaacaagatgaaaagcctccggata
gagagatccaggaatcgcaaaagaaacaaattaccaacttctacagataggaatgccaat
acagtggatatggatcagccagctgctatcgagaagattgagcagactgtggatgaggcg
ttggcccaggctgcagaaaatcttgcccagctggaacacatccatgagaccctgacaact
ggtctagcagaacaggtgaagagagagagagctcggcttgggatggaggtcatgcaagcg
acagacaaagctttacatgctgttcaaaagtggaaagaagcacagattaatcagctgaca
aaacttgaggcacgattctccaccactcaagtgcaggtgtgctgtgtccaggggaggata
aagtccttgaacattgccatgcagatggccagagaagtccgacgtgtccccattctgggg
cagtattgtacccttgataaggttctggagacattgcaggatcctgtggatattcagtcc
tttgatacaaaatgccttactttggattctggaattagttgtgttttccactcagaaagt
ctgaatcagggtctgtcactgtcactgaagatggaacacagtgacccaaagtgcttctcc
gagtctcttcctaaaggccaccagccaggcaactttcccagaatatcccccaggcaatat
tcagagggcaggcatggtagttgcaccccaccaactggcaggaagctccccaccccacat
aaacaggacaaggagagccctggtttgtcatcacggggttcctctccatacccaagacct
cgtcacaggtcaagcctttctcgccacagctcagcctcagatcttggaactccagatgta
attattgaggagctgttcgatgaaagacaagagcacgctctcccacccactggccctgag
ctggctaatgataagtggagaatccagaggagaaggaagagtctgtttgacaataggaga
aatgtcatccagtgggtagcggtaacccatgttgtgaatccaagtcacttctacgttcgc
tatgtggcagagaagagggaacatgaggtcctatctaagaggatcaacagcttcgtccgc
agggataattgtcacttcacttccaatgacacagtggagaccggctctgtggtctttgtt
aagtggaaagcggagctgtggtgcagggccaatgtagttgaagtggtgcagaatgaatgt
gtggaggctgtaaaatcctgcccggtctaccagctggccagcatccgagtcttcctcccc
gactatggcctcaccaagattatcaccatacaaagtgaggagaggatcactgagtcttca
ctgaaagaggtcaacaaccaccttaggaaggtcaatgaggagatgaacatggagctgggt
cactttgctccacaagccatcagatgttcactcaaggaccttgtcccctatgatctggca
aagggttggagtgaagaggcacaggtagaattccagaatatggttggctccgcagcagtg
gagatgcggcctttgggtcaggacagagagtatttgttggtggacctgaggaaagcgccc
atggaccaatccagtgatgtacccatctctgtcagagagttccttgttttcattgaagtg
gccaggttttattctccagtgacgttgggcaggaagcccctgcagtactaccctcctgtc
tatcccaagatgaacacagagctcaatgctgtggtgtcccacatcaacaatcctgcggac
ttctacatccagatggttgacaacatggagtccatgttactctcagccaagctgcaggat
tgttacaatgccacagtggctgggggagatgacctcagggtctactgccctgtgatagga
caggcctatgttgcccgctatgatgacaagttgtggtacagagcacaggtcataggtcat
ccagggggcagaaaagttgaggtgcgatatgtggactttggcaataaggacattttgtca
gtcagcaacttgaggaagattaaggatgagttctttgctcttccttctatggcaatccac
tgttgtttgtcagatgtggtcccactcaatggagagacgtggagtgatgcctgcaccaag
agattcatcagtctggctgaccagaaactcgtcactattgtggctacaggaaaagtgcgc
aaaactgagcctctgccaatcaagctgtttgagagcagcctgaacgggccagttgccagc
atagctgagctactggttaaagaggagctcgttcacttcaaagagggagtcaagtccaag
ggtgccacattccctggagaggattctgacatatgggacaccccactcgagcttgattcg
gtcctggagggtggtgatgcaaaacaaaaagtcgtaagagaactgaacgaggagctgctg
gagattcagcctttgctgaagctccctgccaaactcaaagacctgaaagtcaaagtcagc
cacgtcaactcaccaagcagtttctatgtgcagctcacgcagaacaaccctcagttcaaa
aggatctgtgagagggtgaagcaggagtgtgcactgatggagcccaaagatgtggtgtgg
aaggcagacatgtactgcgctgcactcattactggggcttgggagagaggacagatctgc
tctgacgtcacatccagcaacattgcagaggtgatgcgctgtgaccatggcaacacagtg
aagctccatatcagcaacttgcggccactgccaccctccttgatcggctcttttgctctc
gaatgcactcttactgacatcaggccagcaggaggtcgttcctcctggacggctacagcc
tgcgatatattctctttctatctgaccggagcatcagctgttatgaccatcaaggagttg
acagatgagcgtccagttcctgtcatactgttctgctccaacaagatgggacagtatgtc
agcattgcagactttctggtcagcgagggcctcgccctcagggaaagaaaaccgagagaa
gctgtcactggaaaacccaaagaaactgatgtacagtctccagtgagcgaggcacaaact
gatgtttctgatgctgaccaaaaaaacacttctgcaattcctttaccgtccctgaccccc
ctcgcttccactaccaaccctccaaaaccagccccccgcaccattatgtctgctgaaatg
gtaaagactcagttgtatcaacccccagagctgccatgcctcggtcacatccagttaagt
gtttctgctatcggagaagacggactcatttacgtcagaacacagaatgcagactgtcag
ctggagcagcttcgggagaggattaatcagagtatgaagacattgcccagacagaagcct
tacacctggaagtcggttcttggctgtgccgtcatcggaccagatatgttctggtatcgc
ggacaactgctggaggtgcaaggaggacatgtgaaggtacaatatgtggactatgggctg
gtggagaacatcccagtggtccatgtgtaccccaagctgctgtttgaagatgttcctcag
ctgtgtatgccctgccagctgcacggcctcaaccctgttggtggtaagtggcagggggat
gccgtgtttttgctgagggagattttgctgaaccgctgtgtagacatacaagtcatggag
ctgccaactgacccaaggggacccctcacagttgagctcttccttgatgggctgagcctc
agcaggatcctctgtcactacgaacacgcctccttgaacctgactgtctcagcacagaag
gagggacactcagtgatgtctcctgccttcctggatgattgggacattgacactgagggt
ctgaggggcccagaggagccgatgctggggccctttatcgccccaaaactaccacagaag
ggacagcagtttgaagtcagagtcaagcacctgttgacccctaaggagctcttcctgtgg
cctgtggagggagcagctgagatggaggtggatggattgactctggctgaggctctcgac
agaatcaatgcaaacatcagcagtctgccacaactcaccaacttcccttatggcagtccg
tgtctggcagagtacagtgatgggcagtattaccgtgcaaagctgatcaagttcaccagc
gtggagcccgtcaagatcctggtccgacatgtcgactttggctctgacgacactttgccc
cccagcaagattcgtcagatgccggccgagctgctgagatttccagcgcgggcgctcaag
gtcaaagtggccggcttcaaggctccgagcgtcaacagagagaaagacgtgctgccctac
agtccagcctggagtgtgaaggctgcaagggaaatgatcgagttgttacacaacaacatc
acagcttcggttgtggcccgggaaccagagctcacagtgctgctgtacgacgagaacgga
gagttggtccatctgcctctggtcagcagcggactggctgagctcgattga
DBGET
integrated database retrieval system
