Acanthopagrus latus (yellowfin seabream): 119026320
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Entry
119026320 CDS
T08233
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119026320 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119026320 (bard1)
04121 Ubiquitin system [BR:
alat04121
]
119026320 (bard1)
03036 Chromosome and associated proteins [BR:
alat03036
]
119026320 (bard1)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119026320 (bard1)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119026320 (bard1)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119026320 (bard1)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119026320 (bard1)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
119026320 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_3
Ank_4
Ank_5
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
PTCB-BRCT
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119026320
NCBI-ProteinID:
XP_036966495
LinkDB
All DBs
Position
9:18099201..18123821
Genome browser
AA seq
792 aa
AA seq
DB search
MDNDVLVQTMDWKNTKEAVSNFRRLLLCSKCSMLMKDPVCLGMCEHMLCRSCAGAQAGDG
CVVCHSPAWVKDIQINRQLSSIIELFSGLESLLKPIEQTDSSLTEIQTRPESTVFRQKKS
FKIWLSPRSRKVRCVVEKPSEVTVPESRSSGETAAAQPDTITAQSQDLSVFNFTSSSQDS
GSSSTQRCRNESKNVKKRSTKKNVASRKVPVQGATRNTRKQTNQMMKKNRLETINQQWGI
TKEVDPLKGKEQPCAEGARRSSKRVSFLSPPVASEERQPEMAQGGTNELSPSRSPMRKSP
SRGRGMSDSVIQHDRLSTNDSNPTDNPEKQDDVSTPKHSSKRSRAEEKVAPLETTPKRPR
PSLGRRRKSQMSPAVLNPPTLCSPRCEKIIKKSRQEQGDSPSALATAGRKSPCGHGRPTS
GSPAVMKRNHKGETLLHLAAIKGDVEAVKELLDQGADPNLKDNAGWTPLHEACNLGHLAV
VEVLVSKGALLNTPGYENDSPLHDAVRNGHLAIVKLLLQLGASQSVLNLFGKRPSDYAVS
LEMQEIFQKASEGTKNADATLSPSASLSVVSDCVRKDEMVVFLASKLSQLEQHRLAKLGE
LLGGTMTETFSGSVSHVVLPEGHMPTTYSTLLGLLAGCWVVKFSWVEACLQAGEWMPETE
HEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKAPSKDELTKLLREGGGQFLSRQPKPD
SDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHKPAVVRRGKVWSAPSSWVIDCIAAF
RLLPVPDPQASV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggataatgatgttctggtgcagacaatggattggaagaacacgaaggaggcggtctcg
aactttcgacgactgcttctttgctccaagtgctcaatgttaatgaaggatcctgtgtgt
ctgggaatgtgcgagcatatgctatgcaggtcctgtgctggcgcccaggcaggagatggc
tgcgtggtgtgtcacagtcctgcgtgggtgaaggacatccaaatcaacaggcagctcagc
agcatcattgaactcttctctggtttggagtctctgctcaagcccatagaacaaacagac
tcctctctgaccgagattcaaacacgacctgagagcactgtctttcggcaaaagaagagc
ttcaagatctggttgagcccccgcagccgcaaagtacgttgcgtggtagagaagccctca
gaggtcacagtaccggagagcaggtcttctggagaaacggctgcagcacagccagacacc
attactgctcaaagccaggacctgtcagttttcaatttcacctcgtcctcccaagactcg
ggctcttcttctactcaaagatgtagaaatgaaagcaaaaacgtgaagaaaaggtcaact
aagaaaaatgtggccagcaggaaggtgccggtgcagggagccacgaggaacacacgaaag
cagaccaatcagatgatgaagaagaacaggctggagaccatcaaccagcaatgggggatc
accaaggaggtagatccattaaaaggaaaggagcagccctgtgctgaaggggcaaggagg
tctagtaagagagtttccttcctgagccctcctgtcgcatctgaagagcgtcagccagaa
atggcacaggggggtactaatgaactcagccctagcagaagccccatgaggaagagtccc
tcaaggggtcggggtatgtcagacagtgtcattcaacatgacagactgtccacaaatgac
tccaaccccactgacaatcctgaaaaacaggacgatgtgtctaccccgaagcattcctca
aaaagatccagagcagaggagaaggtcgccccactggagaccaccccaaaaaggcccagg
ccttccctgggcaggaggagaaaatcacagatgtccccagctgtccttaaccctccaact
ctgtgtagccccaggtgtgagaagatcatcaaaaagtcaagacaggagcaaggagacagc
ccctctgccctcgccactgctggcagaaaatctccctgtggtcacggtcggcccacctca
gggagccctgcagttatgaagaggaaccacaagggagagaccctgctgcatctagctgct
ataaagggagatgtagaggctgtcaaagaactgctggaccagggggctgaccccaacctg
aaggataatgctgggtggacacctttgcatgaagcatgtaacctgggtcacctggctgtt
gtggaggtcttggtctccaagggagccctgttgaatacacccggctatgaaaatgactct
ccactccatgatgctgtaaggaacggacatctagcgattgtcaaactgctgctgcagctt
ggagcctcgcaaagcgtacttaatctgtttggaaagcggccctcagattacgcagtgagt
ctggagatgcaggagattttccagaaagcctcagaaggaaccaaaaatgctgatgccact
ctcagcccctcagccagtctctccgtggtgagcgactgtgtgagaaaggatgaaatggtg
gtgtttctggccagcaagctgtcacagcttgaacagcatcgcctggccaaactgggagag
ctactgggagggacaatgactgaaaccttttctggctcagtgagccatgtcgtgctgcca
gaaggacacatgcccaccacctactccaccctcctgggtcttcttgctggctgctgggtt
gtcaaattcagctgggtggaggcatgtctgcaggcgggcgagtggatgcccgaaacggag
catgaagcgggagagggcccccagcgcagtcgcatcaacagatgcagcttgctccctcca
ctgttcgacggctgtttcttcttcctcctcggctctttcaaggcaccctcaaaagacgag
ctcaccaagctgctccgggaaggaggaggtcaattcctgagccggcagcccaagcccgac
agcgatgtgacacaaaccctcagtgcggccgcctaccatgcgctgccaggctccgaccag
gcgctttgcacccagtacatcatctttgacccacagggcccacacaagccggcagtggtg
aggcggggcaaagtgtggtccgctccctccagctgggtcatcgactgcatcgcagcgttc
cgccttctccctgtgccagaccctcaggcatcagtctga
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