Acanthopagrus latus (yellowfin seabream): 119026385
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Entry
119026385 CDS
T08233
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119026385 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
alat04050
]
119026385 (edar)
Cytokine receptors [BR:
alat04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119026385 (edar)
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Ortholog
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GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
DUF2852
Motif
Other DBs
NCBI-GeneID:
119026385
NCBI-ProteinID:
XP_036966627
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All DBs
Position
9:19378980..19419067
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AA seq
522 aa
AA seq
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MKCEAVCSLKNDANMSERRGRKMPSFLTSLLVCCMFASAEYSSCGEYEFFNQTSNSCQAC
PQCQPGQEPHMTCGYGVKDEDFACVPCPQGKYSKGKYEICRRHKDCDALYKATVRVAGTP
DSDAECGPCLPGYYMLENRPRNLYGMVCHSCQNAPRNTKECSTSGQREKPVIDPGSTTVF
PHPHKDPTGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEA
QANKQEDKKDVPDNVVIYSEKDEFDKMKAPPQKTVKSENDASSENEQLLSRSIDSDEEAA
SDKQGSAETSNPNPCLVNLGNKPDLCLLSLGLLDRDPACNGTTTNNIPSPNHIASTNHIS
SANAINNNNKTPGMLQSRRKKILDLYARACNVTEGLSPTELPFDCLEKTSRMLSSSYSSE
AAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESL
CLDVLGSSETGVAAGRQGINSFHSQLVCPTQCSSPSQRCASV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgaagccgtgtgttctttgaagaacgacgcaaacatgtcagagaggagaggt
cggaagatgcccagctttctgacgtcgttattagtgtgttgtatgtttgccagtgcggag
tattccagctgtggagagtacgagttcttcaatcagaccagtaacagctgccaggcctgc
cctcagtgccagccgggacaagagccacatatgacctgtggctacggtgtgaaggatgag
gacttcgcctgcgtgccgtgcccgcaggggaaatactccaaagggaagtacgagatctgc
agacggcacaaagactgcgacgccctctacaaagccaccgttcgcgtcgcgggaactccg
gacagcgacgcagagtgcggaccctgtttaccggggtattacatgctggaaaacaggccc
aggaacctctacgggatggtttgccactcgtgccagaacgcaccacgaaacaccaaagaa
tgctcaaccagcgggcagagagagaaacctgtaattgaccctggcagcacgactgtgttc
cctcatccacacaaagatcccaccgggcaaggtcacctagcaacggccctcattattgcc
atgtcgaccattttcatcatggccatcgccatcgtcctcatcatcatgttttacatcctg
aaggccaaaccgagcggccaggcatgctgttcgggacaagttgtgaaggctgtggaagct
caggccaacaaacaggaagacaagaaagatgtcccagacaatgtggtgatctactcagag
aaagatgagttcgacaaaatgaaagctccacctcagaagacagtgaaaagtgaaaatgac
gcgtcatcagagaacgagcagctgttgagccgcagcatcgacagcgacgaggaggcggcg
tccgacaagcaagggtcagccgaaaccagcaaccccaacccgtgcctcgtcaatctggga
aacaagcctgacctctgcctgctctctctgggcctcttggatcgtgacccagcctgcaac
gggacaaccaccaataacatcccgagtcccaaccacatcgccagcaccaaccacatcagc
agtgcaaatgcaatcaacaacaacaataaaaccccagggatgcttcagagtcgaaggaaa
aagatcctggatctgtacgccagagcctgcaacgtgacagagggcctgagtcccactgag
cttccctttgactgcctggagaagaccagccgcatgctgagctcctcctacagcagcgag
gcggccgtggtgaagacgtggaggcatctggccgagagcttcgggctgaagcgcgacgag
atcggcggcatgagcgacggcctgcagctcttcgagagagtcagcacggcgggctacagc
atccccgacctcctgacccgcctggtacagatcgagaggctggatgccgtggagtcgctc
tgcttggacgttctgggcagcagcgagacgggggtggctgccggccggcagggcatcaac
agctttcacagccagctggtctgtccgacccagtgctcatctccatctcagcgctgcgcc
agtgtctaa
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