Acanthopagrus latus (yellowfin seabream): 119026443
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Entry
119026443 CDS
T08233
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119026443 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119026443 (usp43a)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119026443 (usp43a)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119026443 (usp43a)
Ubiquitin system [BR:
alat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119026443 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119026443
NCBI-ProteinID:
XP_036966738
LinkDB
All DBs
Position
1:complement(18288642..18405232)
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AA seq
1228 aa
AA seq
DB search
MDGRKENKVRNAMKPKTTKRKEKKYKAGRFVRRKSLRSFGNFMGRILKTLGTLAHFGDAE
PPDAEDDDGGFGQSASGGFKDDCAQVSREGTVKKSSSALSSSHGSVKDRLSWCHGDKTPG
VLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDVCHGRVNGEVRGEERQSARGEV
TEQLASLVRALWTLEYTPQLSVEFKSIVAKYSSQFRGNSQHDALEFLLWLLDSVHEDANS
SPNKNSSSKTKANAKGPSSLGDPSNPSTASTQQPRDRHSFVQEHFQAQYRSSLTCPHCLK
QSNTFDPFLCISLPIPLRQTRSMCVTLVFSTKGQRYLRVGLAVPLFGSLSCLRAMVAEEG
NISPDQVILSELYSTGFQRSFADDDDLTAIADSDVVYAFQAPPLYGRGGSNAPHSGYHHS
LPSSPYTSSGASDGQRLPPNGTLSSEYLNQGVSSKVLLLICNTAGSGQQAVRFGPPFLMR
EDRSISWDQLQQSILSKLYYLMLNGSQAQNAGVLFKIRVVGGSAAYSYLSPQDSRPLCHP
AVDRALKFLGPGGPPHVKLVIEWEHKTKECLFGSIQEEVVKDAESVRNQQQQHLQQHSCT
LDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNK
LSTLVRFPLTGLDMAPHVVKRSQSMKNLNLGAWPPSWKQPSGQNHQPADMILPHDYLYDL
YAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVQEEEVCTRGAYILFYQRRNTIP
PWSASCSVRGSTSSSMSDHWLIRLTGDSKRGSLVSRSSTICPSSLPDSPESPVFLDSDSR
EEKGGFESRPFIRGLQGRSVSMRTPSKTKDTLSKVLPLRWSFGAKDRRKPDTVPPPVQDP
APVELVQYLESGRRPRCTKDPIVTLMSEPRGAKEAAEGRAVTSVRSSSVGSISCVGSHGE
GSPQVPEGQRRPSEKIASLRRSKESQTRDESTVNISSSSSSNTLTRRKDTRKQSSSKASQ
DTEAKRSSSAGVQPSYSTPSLHDGTLRRQKGDRADREPHGTYEGNLKTKKGELPKSHDGL
LSFFKGNFLKKDKDSRKSKEGGSWKGGSEEGGRRTLSRLSLSNGAAGGGAGVEGGKSNGT
DHLGDELANGKAGRSTTDIKRSQSSSNIPTKAEHSMRRTASLHRNGMSTAPAPSRSLTTD
KPSYGTLQRTRYSTTSLGRKRTVPESSF
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgcaaggaaaacaaggtaaggaacgccatgaaacccaagacgacgaagcga
aaggagaagaaatacaaagccgggaggttcgtgaggaggaaatcgctgcgatctttcggg
aatttcatgggaaggatccttaaaactttgggcactttggcgcactttggcgacgcggag
cctccggacgcggaggacgacgacggcggcttcgggcagagcgcgtccgggggtttcaaa
gacgactgcgcgcaggtctccagagaggggaccgtgaagaagagctcctcggcgctgtcc
tcgtcgcacggctcggtgaaggacaggctgtcgtggtgccacggcgacaagacccccggc
gtgctgggactgaagaaccacggcaacacctgtttcatgaacgccgtggtccagtgcctc
agcaacacggacctgctggcagagtacctcgggctggagcagtacaagtcggacgtgtgc
cacgggagggtgaacggggaggtgaggggagaggagcggcagagcgccaggggagaggtg
accgagcagctggcgtcgctggttcgagcgctgtggacgctggagtacacgccgcagctg
tccgtggagttcaagagcatcgtggccaagtacagctcgcagtttcggggaaactctcag
cacgacgccctcgagttcctcctctggcttttggacagtgtgcacgaagacgccaactcc
agcccaaacaagaacagcagcagcaagaccaaagcgaacgccaagggacccagttcattg
ggggatccgtctaatcccagtacagcaagcacacagcagcctcgagaccgacacagtttt
gtccaggaacatttccaggctcagtacaggtcttctctgacgtgccctcattgccttaag
cagagcaacaccttcgacccgtttttatgtatctccctgccgatccccctacgacaaacc
aggtcgatgtgcgtgacgctggtgttcagtacgaaggggcagaggtacctgcgagtgggg
ctggctgtgcctctctttggttccctgtcctgtctaagagccatggtggcagaggaggga
aacatctccccggaccaggtcatcctatcggagctgtactccacgggtttccagcgttcc
ttcgcagatgatgacgacctgacggcaattgccgatagtgatgtcgtctatgcctttcag
gctcctcccctctacggtcgtggaggctccaacgcaccgcactcagggtatcaccacagc
ctcccctcctccccctacacctcttcgggtgcatctgatggtcagaggttacctccaaat
ggcaccctctcctctgaatacctgaaccagggcgtctcctcgaaggtcctcctcctcatc
tgcaacactgcaggatctggccagcaggctgtcaggtttggacctccatttctcatgcgg
gaggacaggagcatctcctgggaccagttgcagcagagcatcctcagcaagctctattat
ctgatgctgaacggttctcaggctcagaatgctggggtgctgtttaagatccgagtggtg
gggggatcggcagcctatagctacttgtccccgcaggacagcaggccgctctgccaccct
gcagttgacagagccctgaagttcctcggccctggtggacctccccatgtgaagcttgtc
atcgagtgggagcataaaactaaggaatgtctgtttggcagcatccaggaggaggtggtg
aaggatgcggagagcgtgaggaaccagcagcagcagcacctgcagcagcatagctgtacc
ttagacgagtgcttccagctctacaccaaagaggaacagcttgcccccgatgacgcctgg
aaatgtccccactgcaagcagcttcagcagggcatggtgaagatgagcctgtggactcta
cccgacatcctgatcctccatctcaagcgatttcgacaggtgggcgagcggaggaacaag
ctttcaaccctggtacgtttccccctgactggtttggacatggccccccatgtagttaag
aggagtcaaagcatgaagaacctgaatttaggggcctggccaccttcctggaagcagccc
tcaggccaaaaccaccaacctgccgacatgatcctcccccatgactatctgtacgacctg
tacgctgtgtgcaaccatcatggtggaatgcacggaggacattatactgcttactgcagg
aactcggtggacggacagtggtacagctacgacgacagcagcgttgacctggtgcaagag
gaagaggtatgcacgagaggagcctacatccttttctaccagagacgcaacaccattcct
ccgtggtcagccagttgctccgtcagaggttctacaagttcgtcaatgtcagaccactgg
ctgatccggctgacaggggacagtaagagaggcagcctggtgtctcgatcatctaccatc
tgcccgtcgtccttacctgactcgcctgagtcacctgtcttcctcgacagtgactctaga
gaggaaaaaggggggtttgagagcaggccattcataagaggtcttcagggacgcagcgtg
agcatgagaacccccagcaaaaccaaggacaccctcagcaaagtgcttcccctgcgctgg
tcattcggtgccaaggacagacggaaacctgacacagtgcctccacctgtccaagatcct
gcccctgtggagctggtgcagtacttggaatctggccgccggccccggtgcacaaaagac
ccaatagtaacattgatgagtgaaccgcgcggcgccaaggaagctgctgagggccgcgct
gtgaccagtgtccgatcttccagcgttgggagcatcagttgtgtgggtagtcatggcgag
gggtctccacaagtcccggagggccagaggaggccttcagagaagatagccagcttgaga
cgcagcaaggagagccagacaagagatgagagcactgtaaacatcagcagtagctcaagt
agtaacaccctcaccaggaggaaggataccaggaagcagagttcatccaaagcttcgcag
gatactgaggcaaaaaggagttccagtgctggagttcagcccagctacagcactcccagc
cttcatgatgggactctgagaagacaaaaaggggacagggctgatagggaaccccacggt
acatatgaaggaaacttgaagaccaagaaaggcgagctgccgaagagccacgacggactt
ctctccttcttcaaaggtaacttcctgaagaaggataaggactcaaggaagtccaaagag
ggtgggtcatggaagggtggtagtgaggaaggtggcagaaggaccctctccaggctgtcg
ctgtccaatggggcagcaggaggaggagctggggtggagggaggcaaatctaatggcaca
gaccatttgggcgatgagctggcaaatgggaaggcgggacgaagtaccactgacatcaaa
cgctcccagagctcttccaacatccccaccaaagcggagcacagcatgcgcaggacagca
tctttgcatcgtaacgggatgtctacagccccagcgccatcgcgcagcctcacaacagat
aaaccgtcttacggcaccctgcagaggactcgatacagcacaacctcactgggacgcaag
aggacggtccccgagtccagcttctag
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integrated database retrieval system
