Acanthopagrus latus (yellowfin seabream): 119026522
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Entry
119026522 CDS
T08233
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145
Phagosome
alat04148
Efferocytosis
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
alat04810
Regulation of actin cytoskeleton
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119026522 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119026522 (itgb5)
04148 Efferocytosis
119026522 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119026522 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119026522 (itgb5)
04810 Regulation of actin cytoskeleton
119026522 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119026522 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119026522 (itgb5)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119026522 (itgb5)
Cell adhesion molecules [BR:
alat04515
]
Integrins
Integrin beta subunits
119026522 (itgb5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
119026522
NCBI-ProteinID:
XP_036966887
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All DBs
Position
9:3420377..3475345
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AA seq
803 aa
AA seq
DB search
MWSPGTWLWRAAVCCVLLETCLHSARGLNMCMSGSATSCEECLLIHPSCAWCAQEDFGRG
RGLTSRCDLIQNLQRRGCGAQFIEYPTSSISVLKNMPLSSTGSGLAQFDVVQIMPQKISL
SLRPGEQTSFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAHEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQENPCSGYKLFPNCVPTFGFRHILPLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKTEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVEPH
DGQCHLNDRNEYSASTEMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIIAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKCADL
KIGDTVSFNVAVEARGCPPRGTDQSFTIKPVGFKDRLEVAVNYQCDCGCSQTAQTNSSIC
SSIGTYNCGTCRCEPGYLGARCECQEGEASSTYHSACREAEGKQICSGRGECSCNQCLCF
ESDFGKIYGSFCECDDFSCARHKGVLCSGHGECHCGECKCHAGYVGDNCNCSTETSPCIS
DDGKMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQ
TCQRLCKDEIITVENLKTDDPGAVLCLYKTDNDCVMKFTYSEHASGQSILTALKEPECGG
GPEAMTVLLAVVGSILLVGVVLLAAWKLVITIHDRREFARFQSARSRARYEMASNPLYKQ
PVSTHFVETDFNMYGKSYNGGLH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggacgtggctgtggagagcggcggtgtgctgcgtgctgctggaaaca
tgtctgcacagtgccagaggtctcaacatgtgtatgagtggcagcgctacttcctgtgaa
gaatgcctcctgattcaccccagctgcgcctggtgcgcacaagaggactttgggaggggg
cggggtctgacgtcccggtgcgatctgattcaaaacctgcagcggaggggctgcggggcg
cagttcatcgagtaccccaccagcagcatctctgtcctgaagaacatgccgctgagttct
acgggctcggggttggcccagttcgacgtcgtccagatcatgcctcaaaagatctctctc
agcctgcggccgggagagcagacgtcgttcgggctgcaggtccggcaggtggaggactac
ccagtggatctctactacctgatggacctctcgctttccatgaaagatgatctggacacc
atccgtaacttgggcaccaagctggcgcacgagatgggcaagctcaccagcaacttcagg
ctgggctttgggtcctttgtggataaaaacatgtcccccttttcctacacagcacccaag
taccaggagaatccgtgcagcggatacaaactgttccccaactgcgtccccaccttcggt
ttccgccacattctcccgctgactgataaggtggaccgctttaacgaggaggtgcagaag
cagatggtgtctcgcaaccgggacgcaccagagggcggctttgacgccatcctgcaggct
gctgtttgcaagacggagatcggctggagaaaggaggcctaccacctgctggtgttcgcc
acagacgacgtcccccacctcgctctggacggcaggctgggaggcctcgtcgagccccac
gacggacagtgtcacctcaatgacaggaacgagtacagcgcctccaccgagatggactat
ccctctctggctcttctgggggagaaactggcagaaaataacattttcctcatcttcgca
gtgacaaaacggctgtatgttatttataagaattttactgcactcatacctggaaccaca
gtagagatcctggaccaggactccaagaatgtaattcagctcatcatcgcagcttacaat
aacatccgttctaaagtggagctgtcagtgtgggatcacccagaggacatcagcctttcc
ttcaccgccacctgccaggatggaaagccgctgccaggcctcaggaagtgtgccgacctg
aagataggagacacggtgtcgttcaacgtggctgtggaggcgaggggatgcccgccccgc
ggcactgaccagagcttcaccatcaagccggtggggttcaaagaccgcctggaggtggct
gtgaactatcagtgtgactgcggctgcagtcagacagcgcagaccaacagcagcatctgc
agctccataggtacttacaactgtgggacttgtcgctgcgagcctggctacctgggcgcc
cgctgcgagtgccaggagggcgaggccagcagcacgtaccacagcgcctgccgggaagcc
gagggcaagcagatctgcagcggacgaggagagtgcagctgcaaccagtgcctgtgcttc
gagtcggactttggcaagatttacggcagcttctgcgagtgtgacgacttctcctgcgcc
cggcacaaaggagtcctctgctcaggtcatggagagtgccactgtggggagtgtaaatgc
cacgctggttacgtcggagacaactgtaactgctccacagagacgtcgccctgcatttca
gacgatgggaagatgtgcagcgggcgaggcaactgtgtgtgcggccgctgtcagtgcacc
gagccaggagcctttggagatacctgcgaaaagtgccccacctgccctgacgcctgcggc
actaaaagggagtgtatcgagtgccggcttttcaactcaggacgacttgcagacaaccag
acgtgccagcgcctgtgcaaggatgaaatcatcaccgtggagaacctcaaaacggacgac
cccggcgctgtgctttgtctctataagacagacaacgattgtgtcatgaagttcacgtat
tctgagcacgccagcggacaatccatcctcacagctctgaaagagccagagtgtggtggt
ggtccagaagctatgacggtgctgctggcagtggtgggcagcatcctgctggtgggagtt
gttctgctggctgcctggaagctggtcatcaccatccacgaccggcgagagtttgcacgt
tttcagagtgcacgttcacgagcccgatacgagatggcatccaaccctctgtataagcag
ccggtctctacacactttgtggaaacagatttcaacatgtacgggaagtcttacaacgga
gggctccactga
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integrated database retrieval system
