Acanthopagrus latus (yellowfin seabream): 119026750
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Entry
119026750 CDS
T08233
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119026750
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119026750
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119026750
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119026750
NCBI-ProteinID:
XP_036967186
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All DBs
Position
1:complement(18945973..18952416)
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AA seq
427 aa
AA seq
DB search
MAETDVDNELLDYEEDEEPQGAPESGTPASKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGMAIKKDEEVLKKNCPHIVVGTPGRTLALIA
HKSLNLKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagactgacgttgataatgaacttctggactatgaggaagatgaggagccccag
ggagcccctgagagtgggacccccgcaagcaagaaggaggttaaggggtcctatgtatcc
atccacagctcgggcttcagggactttcttctcaaaccagagctgcttcgtgccattgtc
gactgtggttttgagcatccctcagaagttcaacatgagtgcattccccaagctatcctg
ggcatggacatcttgtgtcaggccaagtctggtatgggaaagacggcagtgtttgtactg
gccaccctgcagcagatagaacctgtggatggtcaggtgtctgtccttgtaatgtgccac
acacgagagttggccttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
actgtcaaggtctctgtgttcttcggtggcatggctattaagaaggacgaggaggtcctg
aagaagaattgccctcacattgtcgtcggaactccgggacgtaccctggccctaatcgcc
cacaagagcctcaacttgaagaacattaaacactttgtgcttgacgagtgtgacaagatg
ttggagcagctggacatgaggcgtgacgtccaggaaattttcaggctgacaccccatgag
aagcaggttatgatgttcagtgcaacgctaagcaaggagatccgcccagtgtgccgcaag
ttcatgcaggatcccatggaagtgtttgtcgatgacgagacaaagctgactctccacggc
ttacagcagtattactgcaagttgaaggacagtgagaagaaccgaaagctcttcgacttg
cttgatgtgctcgagttcaaccaggtggtgatttttgtcaagtcagtgcatcgctgcgtg
gctctttctcagctgctggtggagcagaatttcccggctattgccatccacagaggcatg
gcacaggaggagcggttatcccgttaccagcagtttaaagacttccagcggcggatcctg
gttgccaccaacctgtttggccggggcatggacattgagcgagtcaacatcgtcttcaac
tacgacatgccagaggattccgacacataccttcacagagtggcccgtgccggcaggttt
ggtaccaaaggcctggccatcacttttgtgtctgacgagactgacgctaaaaccctgaat
gatgtccaagaccggttcgaggtcaacgtagcagagctaccagaggagatcgatatctcc
tcctacattgaacagtccagatga
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