Acanthopagrus latus (yellowfin seabream): 119026825
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Entry
119026825 CDS
T08233
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
alat04054
]
119026825
Pattern recognition receptors [BR:
alat04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
119026825
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_1
LRR_NXF1-5
LRR_EndoS
LRR_LRWD1
ThsB_TIR
LRRNT
Motif
Other DBs
NCBI-GeneID:
119026825
NCBI-ProteinID:
XP_036967292
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Position
10:complement(2716393..2722102)
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AA seq
945 aa
AA seq
DB search
MRATGSCPLFLVFLLSFLLHLHLSLAFSLKNCMIVFPESPNNLTVLCKKRDLTVIPDDIP
INVTSLDLSTNHILKITNTDLRCLSKLMSVRVNFNSISHVDDGAFVDLTELRTLSMSNNK
LTNLTDNIFKGLFKLVTLTLSSNQISYISPRAFQSLVSIQSVELNNNRLHRITHITPILK
LPTLHKLSISCNEFASFRSDDLPLHVSNLRSLELDMNPVRKFSIRKDIFPHLQFLSLCSY
GREMEWDVANKTFLRSVTSLSLRQADVSFQPYSAVLQTTESLQVLHLKFMKTLIEKGLID
IACQIPSLRLLSVAFSDIHTINDTLLRSCSQVTELGFSYDTLSELSEHSFRSMTRLRFLS
LNGNDLSQVPLALRGLSTLEMVDLSFNFISDLDCHGFLNLTKLTKLNLKHNRISKLHGCV
FKYLTNLNVLNIEDNSVYKFYSAFKINLRKLESLNLHNHHLLNIMQGDFVGLSSLRVLDL
ESDTDAAVEDGAFEGLDNLQTLSVSLGSYRTELFIGIPQLENLTLHLTYDLNQRSFLQKD
DAPFSNLPCLKKLVLKVYDQRQEVVSPDLLKGLKSLEYFTAEKFLIRSLHPDTFKYTPKL
KDLHIVDSDLSDLTPELFWPIPNLQTLDLSNNNFRSLDFLARANLAALSWLKISENELSS
INETVFQSLPALMYLDLTGNPLACECSNAGFNQWVQSNNQTQVVNGHQYTCAFPLSQQGN
KFLDFDAHSCWIDGSFLYFLSSTCLVVFTLLASFIYHFLRWHLAYSYYLFLAFLYDKRRK
ASPHHYDAFVSYNIHDEAWVYREMLPVLEGEQGWRLCLHHRDFEPGKPIVENITDAIYGS
RKTICVISRHYLQSEWCSREIQMASYRLFDEQEDVLILLFMEDIPAHQLSPYYRMRSLVK
RRSYLSWPQAAQHTGVFWENIRRALDTADRPADNRHLLTGRPDFI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcgagccacaggaagttgtcctctgtttcttgtttttcttctctctttcctgcttcat
cttcatctttcactggctttttcactgaaaaactgcatgattgtctttcctgaaagtcca
aataatctgacggttttgtgcaaaaagcgtgacctcacggttattccagatgacattccc
ataaacgtgacatcactagatctgagcacaaatcatattttgaagatcaccaacacagat
ctgagatgtttatcaaagctcatgtctgtacgagttaactttaactcgatttcacacgtt
gatgacggagctttcgtcgacttgactgagttaaggaccctgagcatgagtaacaataaa
ctcacaaacctgacagacaacatctttaaagggctcttcaaactggtcacacttactctg
tccagtaaccagatctcatacatctccccgagggcctttcagtccctggtcagcatacag
agcgtagagctcaataacaatcgcctacatcgaattacacacattactccgatcttaaaa
ctaccaactttacataaattgtccatttcttgcaatgagttcgcctcttttcgatcagat
gacctgcctcttcatgtctcaaacctgaggtctctggagctagatatgaacccagtgagg
aagttcagcattaggaaggacatctttcctcatctgcagtttctcagtctgtgcagttat
ggacgtgagatggagtgggacgtagcaaacaagacctttctgaggagcgtaactagtttg
tcactgagacaagctgatgttagctttcagccgtacagcgcagtgctgcagaccactgaa
tcactacaagtacttcatctgaaattcatgaagacattgatagaaaaaggtctcatagac
attgcctgccaaatcccctctctaagacttcttagtgtggcatttagtgatattcacacc
atcaacgatacgctgctgcgatcttgttctcaagtaactgaacttggtttctcttatgat
accctgtcagagctgtctgagcattcattcagatcaatgacacggctcagatttctctca
ctgaacggtaacgatctgtctcaagtgccacttgccctccgaggactctccacactggaa
atggtggatctgagcttcaacttcatcagtgatctcgactgtcacggcttcctgaatttg
acaaaacttacaaaacttaatctcaaacacaatcgcatttcaaaacttcatggatgtgtt
tttaagtatctgaccaatttgaatgtcctgaatattgaagataattctgtttacaagttt
tacagtgccttcaaaattaatttacgtaaattagaatctttgaatttgcacaatcatcat
cttctgaacatcatgcaaggagactttgtgggtctgtcttccctccgtgttttggattta
gaatctgacacagatgcggcggtggaggatggggcctttgaaggactagataatctccaa
actcttagtgtttcactcggtagttacagaacagagcttttcataggaataccacaatta
gaaaatctcacactccatcttacctatgaccttaaccagaggagctttctacaaaaagat
gatgcacctttctcaaatttaccctgcctgaagaagcttgtactcaaagtttatgaccaa
cgtcaagaagttgtttcaccagatctgctcaaaggtctgaaatcacttgagtatttcaca
gctgagaagttcttaataagatcattgcacccagacacatttaaatacactcctaaacta
aaggatcttcatatagtcgacagcgatctgtcagatttaacccctgaactgttctggcca
atcccaaacctgcagacgctcgacctctccaacaataacttcaggtctttggatttcctg
gccagggccaacctggcagcactcagctggctgaaaatcagtgagaatgagttgtcatct
ataaacgagacagtcttccaatccctccctgccttgatgtatctggacctgactggtaac
cctttagcatgtgaatgctctaacgctggcttcaaccaatgggtgcagagcaacaaccag
acacaggtcgtcaacggccaccagtacacttgtgcctttcctctgagccaacagggaaac
aagttcctggactttgacgcacactcctgttggatagacggcagctttctttacttcctc
tctagcacctgtctggttgtgtttactctgcttgcatccttcatctaccacttcctcaga
tggcacttggcctactcctactacctcttcttggccttcctctatgacaagaggaggaag
gcctcgcctcaccactacgatgcttttgtctcctacaacattcacgatgaggcctgggtc
tacagggagatgcttccagtcctggagggggagcaaggctggagactgtgtctgcaccac
agagactttgaaccaggtaagcccatcgtggagaacatcacagacgccatctatggcagc
aggaagaccatctgcgtgatcagccggcactacctgcagagtgagtggtgctccagggag
atccagatggccagctaccgtctgtttgatgagcaggaggacgtgttgatcctgctgttc
atggaggacatcccggcccatcagctgtctccgtactaccggatgaggagtctggtgaag
agacgcagctacctgagctggccacaagccgctcaacacaccggagtcttctgggagaac
atacggcgagctctggacacagctgacagacccgctgacaacaggcacctcctcaccgga
cgcccagacttcatctag
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