Acanthopagrus latus (yellowfin seabream): 119027099
Help
Entry
119027099 CDS
T08233
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat02010
ABC transporters
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119027099
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119027099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119027099
Transporters [BR:
alat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119027099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
119027099
NCBI-ProteinID:
XP_036967866
LinkDB
All DBs
Position
10:complement(19003414..19172952)
Genome browser
AA seq
2256 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFFILVLVRSTNKPFYKGQCHYPNKA
MPSAGVLPWLQGMVCNVDNPCLSYPTLGETPGQVNNFNNSIISGMLIELQTLLVNRSILS
KAQVLADDIDQWNSIMSQSNPGNGQPVILRSILRDDETFSTHLKENLTVPPTVVQSLMNA
QIKLNSMMGTPRPGNLRSILCEGTDLDQYVQFSSQAEKEAFQNVSCSLTPQQLINTQQVL
LQNLDARRVLSELPSALDLNTADSAALVRKIGQDAVPVIEELARLQNSMILKAADALDFQ
RDMFGSIGTLLCKTQTDSNSTKMPFTLRSPRSMHHNMANSMGNSSDAFCQTLVDTLEGTP
GLRYIWSTFKPLLQGKVLYAPDTPAARLIVKEANSTFTALAMLKELADSWDELGPRVWDL
FQNSPRVEAVRTLLANPLFAVVFNQRLGGTGWTAERLANFLYSGPPEDRPPGMQPYDWRN
VHNTTTQIMKLLSNFLGCLDLNKFEAFPTEGHLVTKALDLLENGTFWAGVVFENLQQDAS
QPPPYVKYKIRMDIEEVERSNKLKERLWFPGARDNSFNDLRYIWGGFAYLQDMMDHGIIR
AHTSKTQPLGVFAQQMPYPCFVDDGFLRSLARSLPLYMTLAWIYSVAVIVKSIVAEKEAR
LKETVRIMGLKSAIYWLSWGVSSSLPLAVSSLLLALILKYGKVLQYSDPSVIFVFLLVFC
LATITQCFFISVFFSKANLAAACGGLIYFVLYLPHVLCFAWSDVMSFGAKVAVSLLSCVA
FGYGCETFAKYEQQGVGIQWYNINLSPEEGNRYTFIVSIFMMLIDAAIYWVLTWYIENVF
PGQYGIPKPWYFPFTSSYWCGTASRTRVDPDLLKDSTAYSEYLEKPPPNLKAGVSIRNLV
KIYKTGKKLAVDGLSIDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIL
SDMDSIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGCSRDEVKIEMDQMIKDVGLPHKR
KELAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQARTIIL
STHHMDEADILGDRIAIISHGQLRCCGSSLFLKKYFGSGYYLTLVRDGTEKMTAQRNGII
HSQAKEEKGCPSRSSSIDDGIGSTSWSNSDPSDLTAVGKLVRRHVPEAVFLESIGQEITY
ILPYSGARDGTFALLFQELDLAMAELGLTSYGISDTTLEEIFLKVAEDTGVDAEIPRNNM
ASCRAATELLVRDCKRSSRTSKRNSIASAHSKTEHVSGINELKEKFTSKVEDSKRNATVN
GKGSTVITGWKLIRRQFLALFIKRFHYARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFT
EYPSLELQPWMYGLPQTTFYSNDGPDNVEVSRVVETLVNEPGFGTRCMIGDPIPKLPCSP
SGSEWFTPPVDQSVVDIFLNGNWSMSNPSPSCECSTPERSFMLPDCPPGAGGLPPPQRIQ
NTTDTLLDLTGRNMTDFLIKTFERQGKKRYGGISVGGVNSQVHLNESAIEDAFRDLKNLF
SSFQDNLTDQILPKAETLLKKLGTRDNVKVWFYNQAWHGMVSFLSTANNAILRGNLPAGQ
DPRQYGISVSNHPLNLTKEQLSYAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVN
KAKHLQFVSGVNPAVYWLANFAWDMCNYVIPCLIVIVIFLCFQQKAYVSPANLPALILLL
VLYGWSITPMMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDDNVTRINDI
VKQVLLIFPHFCLGRGLIDMAKNQAMDTLFSSFGENRFKDPLGWDMVGKNLCAMFIEGIV
MFALTILIQYKFFCKPRLISAKSLSAEEEEDIDVARERRRLYEGGAQDDLLKICDLTKVY
PRKRSPAVDRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEM
RNVHQNLGYCPQFDAIDDLLTGKEHLEFYARLRGVPEEEVTMVAEWGIQKLGLVKYSNKS
AGTYSGGNKRKLSTAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSIIREGRSVILTS
HSMEECEALCTRMAIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQK
NFPGSVLKEKHHNTLQYQLPYEQGALANIFSVFTSHQQRLEVEDYTVSQTTLDQVFVNFA
REQHEDKDCEAYDNPVDTSDELPLKSVRTAREAQMV
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcaccctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggttgtagaagtgatatggcctctgtttctcttcttcatactggtg
ttggtgcgctcaaccaacaaaccattttacaaaggccaatgccactacccaaataaagcc
atgccatcagctggtgtgctgccctggcttcaaggtatggtgtgtaatgtcgacaatccc
tgtttgagctatccaacgctgggtgagacaccgggccaagtcaacaactttaacaactca
ataatttctgggatgttgatagaactgcaaacgctcctggtgaacagatctattctcagc
aaggctcaggtgcttgcagatgacatcgaccagtggaattctataatgtcacagtccaac
cctggtaatggtcaaccagtgatcctaaggagtatcctacgagatgatgagactttctcc
actcatctcaaggagaatttgaccgtgccacctacagtggtccaaagcctcatgaatgct
cagattaaactcaattcaatgatgggcaccccgaggcccggcaacctgaggagcatcctg
tgcgaggggacagatctggatcagtatgtccaatttagcagccaagctgaaaaggaggct
tttcaaaatgtcagctgctccctcactccgcagcagctgattaacacccagcaagtgctc
ctgcaaaacctggatgcgaggagagtgctctctgagcttccttcagctttggacctgaac
acagcagactcagctgcgttagtgaggaaaatcggtcaggatgcggtaccagtgattgag
gagttggccaggttgcagaactccatgatccttaaggctgcagatgcattggatttccaa
agagacatgtttggcagcatcggtacgctgctgtgtaaaacgcagactgactctaattcc
accaagatgcccttcactttacgctcgcctagatcgatgcatcacaacatggcaaactcc
atgggcaacagttctgatgctttttgtcagacccttgtcgacaccctggagggcacacct
ggtctgcgctacatttggagcaccttcaagccgttattgcaagggaaagtcctctatgca
cctgatacacctgctgctcgcctcatagtgaaagaggcaaacagcacattcaccgcgttg
gccatgctcaaagagctcgctgattcgtgggatgaactcgggccacgtgtctgggatctc
tttcaaaatagccctcgagttgaagcagtccggactctgctggcgaatccgctgtttgct
gttgtcttcaaccagcgtctcggcggcacagggtggacagccgagcggctagccaacttc
ctgtacagcggacctccagaggatcgtccacccggcatgcagccctacgactggcgaaat
gtccacaacaccactacccaaatcatgaagctcctctccaacttccttggttgtttagac
ctgaataagtttgaggcattcccaactgaaggccatctggtgaccaaagccctggacctt
ctggaaaacggtaccttttgggccggtgttgtctttgagaacctccagcaagacgccagc
cagcctcctccttatgtcaaatacaaaatccgcatggacatcgaagaggtagagcgcagc
aacaaattgaaagaaaggttatggtttcccggggcccgagacaactcctttaacgacctg
cgctatatatggggaggcttcgcctacctgcaggacatgatggaccacggcattatacga
gcgcacacgtcaaagacccaaccccttggtgtttttgcccagcaaatgccatacccttgc
ttcgtggatgacgggttcctccggagtctggcacgctccctccccttatacatgacctta
gcctggatctactctgtggccgtgatcgttaaaagtatcgttgcagagaaagaggccagg
cttaaggagacagtgaggatcatgggcctgaaaagtgccatctattggctgagctgggga
gtgtcgagttccctgccgctggctgtcagctctctcctgcttgcccttatactgaagtat
ggcaaagtgctgcagtacagcgacccgtctgtaatctttgtcttcctgctggtgttctgc
ctggccaccatcactcagtgcttcttcattagcgtcttcttctctaaggccaacttagca
gcggcgtgtggtggcctcatctactttgtcctctacctgccgcacgtcctttgcttcgcc
tggagcgacgtcatgagttttggggccaaggttgccgtgagtttactgtcctgtgttgct
ttcggctacgggtgtgagacctttgccaagtacgagcaacaaggcgttggaatccagtgg
tacaacatcaacttgagtccagaagagggaaaccgctacaccttcatcgtgtccatcttt
atgatgctcatcgacgctgctatttactgggtgctcacctggtacatcgagaatgtcttt
ccagggcagtatggaatcccaaagccatggtacttccctttcacttcatcttattggtgt
gggacagcctcgaggacccgcgttgacccagacctgctgaaggactccacagcatacagc
gagtatctggagaaaccaccgccaaatctgaaggcaggggtctcaatccgcaaccttgtt
aaaatctacaagactgggaagaagcttgctgtggacggactgagcatagacttctatgag
aatcagattacatcttttcttggccacaatggagccggcaaaacaaccaccatgtcaatt
ctgacaggactcttcccgcctacatcaggaacagctctcatcaacggatacgacatcctc
tccgacatggacagcatccgaaagtacctgggaatgtgcccacagcacaacgtcctgttc
aatgaactgacggtggaggagcacatctacttctatgcgcggctgaaaggatgcagccgc
gatgaagtgaaaattgagatggaccagatgattaaggatgttggcttgccacataagcgg
aaggagctcgcaaagaacctgtcaggtgggatgcagaggaagctgtctgtggctatagca
tttgtcggcggttcaaaaatcgtcatcctggatgaacctacagcaggagtggacccctac
gcccgcagggggatctgggaactgcttttaaagtacaagcaagctcgcaccatcatcttg
tccacacaccacatggatgaggccgacatcttaggtgatcgcatcgccatcatctcccat
ggacagctgcgttgctgcggctcctcactgttcctcaagaaatactttggcagcggctac
tatctcactctggtccgagacggaactgagaagatgacagctcagcgaaatggcatcata
cacagtcaagccaaagaggagaaaggctgtccttcgaggagcagcagcatagatgacggc
attggcagcacaagctggagcaactccgatccctcagatttaacggctgtgggtaagctt
gtgcggcgccacgtccctgaggcggtcttcctggagagcatcggtcaggagatcacctac
atactgccgtatagcggagcgagagatgggacctttgctctgctcttccaagagctcgac
ctggccatggctgaacttggcctgacaagctacggcatctctgacacaacgctggaagag
attttccttaaagtggcagaagataccggagtggatgcagaaataccaaggaataatatg
gcgtcatgcagggcagcaacggagctgctggtgagagactgcaagagaagctcccgcaca
tccaagaggaacagcatcgccagcgcccacagtaaaacagagcacgtctctggaataaat
gaattgaaagaaaagttcacaagtaaagttgaagactcaaagaggaacgccactgtcaat
gggaagggatccacagtcatcactggatggaagctgatcaggaggcagttcctggcgctc
tttatcaagcgcttccactacgcccgaaggagccgcaagggactcattgcccaggtggtc
ctgcctgctgtttttgtgtgtctgtctttgatcttctcgctcatcgtgccaccgttcact
gaatacccgagtctggagctgcaaccgtggatgtacggcctgcctcagaccaccttttac
agcaacgatgggccagataatgtggaggtgtctcgggtggtggaaaccttggtgaacgag
cctggctttgggactcgctgcatgattggagacccgataccgaagttaccatgctcaccg
agtggctctgagtggttcactccacccgtggatcagtctgtcgttgacatcttcctcaat
gggaactggagcatgtcaaacccgtccccctcctgtgagtgcagcacacctgaacggtcg
ttcatgttacctgactgtccacccggtgcaggagggctcccaccacctcagaggatccag
aacacaacagacacattgttggatttaactggccggaacatgacggacttcctgatcaag
acttttgagcgccagggtaaaaaaaggtacggagggatctctgtcggaggggtcaactcc
caagtccatctgaacgagtcggcaatcgaagatgcattcagggatctaaaaaaccttttc
agttcatttcaggataatttgactgatcagatcctccccaaggctgagacgctgctgaag
aagctgggaaccagggacaacgtaaaggtgtggttctacaaccaggcatggcacggcatg
gtgtccttcctcagcacggccaacaacgccatcctgagaggaaatctgccggcaggacag
gacccccgacagtacggcatctctgtgtccaatcaccccctcaacctcaccaaggagcag
ctctcctacgctgccatggccacgacctccactgacgtggttgtgtccatctgcgttata
tttgccatgtccttcatccctgccagctttgtcctcttcctcatccaagagagggtgaat
aaagccaagcatctgcaatttgtcagtggagtaaacccagctgtctactggttggccaac
tttgcctgggacatgtgtaactacgtcatcccgtgcctgattgtgattgtgatcttcctc
tgctttcaacaaaaagcctacgtttcacctgctaacctgccagctctgatactgttgctc
gttttgtatgggtggtccatcacccccatgatgtaccccgcctccttcatcttcagcgtg
cccagcacagcctacgtggtgctgacctgcatcaacctcttcatcggcattaacggcagt
gtggccacctttgttatggagctctttgatgatgataatgtcacccgcatcaacgacatc
gtgaagcaggtgctgctgatattcccgcatttctgtctgggcagagggctgattgacatg
gccaagaaccaggccatggacaccctcttcagcagttttggggagaaccgcttcaaggac
cccctcggctgggacatggtgggaaagaacctctgcgccatgttcatcgagggaatcgtc
atgtttgccctcacgatcctcatccagtacaagttcttctgcaagccgaggcttatttca
gcgaagtcattatctgcagaggaagaggaggatatcgacgttgctcgggaacgcaggcgg
ctgtacgaaggcggggcccaggatgaccttttgaagatctgcgacctcactaaggtatac
cctcggaagagatctcctgctgtggacaggctatgtgtgggcgtacctgctgcagagtgt
ttcgggttgctgggaatcaacggggctgggaaaaccaccacgttcaagatgctgacagga
gacatcccagtctccagtggagaggccttcctaaatggatacagcatccgaacagaaatg
agaaatgtgcaccagaacttgggctattgcccccagttcgatgccatcgacgacctgctg
actggaaaagaacatctggagttttacgcgaggttacgaggggtaccggaggaagaggtc
accatggtggccgagtgggggatccagaagttggggctggtcaaatattccaacaagtca
gcaggaacctacagcggtgggaacaaacgcaagctctcgacagcgatcgccttgatcggc
tgtcctcctgtgattttcctggatgagcccaccactgggatggaccccaaagcccggcga
ttcctgtgggactgcatcctgagtatcatcagagagggacgttcagtcatcctcacatca
cacagtatggaggagtgtgaagcactgtgcacccgtatggccatcatggtgaatggtcgt
ttcaagtgtttggggagcatccagcatctgaagagcagatttggcgatggctacacagta
atcgtgagggtcggcggctctcctcctgccttgaagccagtcgaggactttgtccagaag
aacttcccgggcagcgtcctgaaggagaagcatcacaacacgctgcagtatcagctcccg
tacgagcagggcgctctggccaacatcttcagcgtgttcacaagccatcagcaaaggctg
gaagtcgaagactacactgtgtcccagaccactctggatcaggtctttgtgaattttgca
agagagcagcacgaggacaaggactgtgaagcctacgacaacccggtggatacctcagac
gagctgccactgaagtctgtgaggaccgcccgagaagcccagatggtgtga
DBGET
integrated database retrieval system
