Acanthopagrus latus (yellowfin seabream): 119027233
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Entry
119027233 CDS
T08233
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04217
Necroptosis
alat04622
RIG-I-like receptor signaling pathway
alat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119027233 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119027233 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
119027233 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119027233 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119027233 (si:cabz01101003.1)
Enzymes [BR:
alat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119027233 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C67
119027233 (si:cabz01101003.1)
Ubiquitin system [BR:
alat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119027233 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
EAD8
Motif
Other DBs
NCBI-GeneID:
119027233
NCBI-ProteinID:
XP_036968125
LinkDB
All DBs
Position
10:5581815..5589074
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AA seq
985 aa
AA seq
DB search
MSGGHESNRKRRPPKMFLISTDLKVQDQLDGTIRLQRGFLCQEQDKSRGDSLWVKVLDND
IMLKLERKFLHEVPADLSGLLEPVTDPEARLKLLSNPGKLQQFAALPLDAPLWVQIGQQD
ELAEAELKYIGPLTRGSSAVIFGVQLKGSAAGRGISNGSYKGNRLFSCPEGCALFLPVSH
IRPRHWSRSNGSDPHERGRERDHHRNGSSHPDNGHHGNNSRPNPHPHHHQQQQQQQQQQQ
QQQQPSRHISFHQHRPSSPPQSFGILPRAAESGVTVQHHVQVRGPSSPPPFQVGQRVCFP
LEDSVCGGEVRYCGLLPGRSSSGMYVGVLLDTPAGSWDGFYKGEKLCHIPSSLYGHLLPI
TKVSAESKSHRHNPLPQIPKSILKPVPPPGTRPVPLSPPPSAPKVALMPPSKQPLKPPPL
PPPKPTLKPLPPVPPPKPHSPTSLNTTDQPQHTNGVHGPPSPLRSPDSGEAAGEDGEDGE
LEVGSMVEVNDPPLFGVIRWIGRINGISAQVAGIELDQELSAGTDGSYLGERHFRCPPNK
GLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFAEWGSERVDEHTPPVDGEEASELYEGR
KRGIQGHLNSCYLDATLFSLFSCCSSADWVLFWPSDTEKDQTSGQAQDLLRCEIVNPLRR
YGYVCASKTMALRRLLEAANSNTGFTNQEKDPEEFLNKLFQLLRVEPLLKIRSMSQQPQE
CHLYQLFPPTLPPSPSSPLSPVESPIPLLASPSPSRMRVASVQALLESSFLHAGLKFVEA
PSCLLLLMPRFGKDFKMFDAILPSLSLDITDLLDDTLRQCSICQAVAEWECLQCYEDLDI
TPGRLKQYCQTCNTQVHSHRKRESHIPVKVSVPGGPWTGPLHCTRQRMSLFAVTCIETSH
YVSFVKHGPLPTDWLFFDSMADREGGENGFNIPQVKVCPEVGRYLSLSQEELSRVDPSSL
RESARRLLCDSYMCLYHSPELSLYK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggtcatgagtcaaacaggaagcgccgccccccgaaaatgtttttgatctcg
accgacctgaaggtccaggaccagctggacggtaccattcggctgcagcgggggttcctg
tgccaggagcaagataagagcagaggcgacagtctctgggtgaaggtgttggacaatgac
atcatgttaaaactagagaggaagttcctgcatgaagtcccagctgatctgagcggcctg
ctggagcctgtgaccgacccggaggcccgcctcaaactcctcagtaatccagggaagctg
cagcagtttgctgccctgcccctcgatgctccgctgtgggtccagatcggccagcaggac
gagctggcggaggcggagcttaaatacatcgggccgctcaccagagggagcagcgctgtg
atatttggggttcagctcaagggctcagcagccgggagaggaatcagcaacggatcctac
aaaggcaaccggctcttcagctgccccgaaggctgcgcccttttcctcccggtcagccac
atcaggccccgccactggtcgcgcagcaatggctccgaccctcacgagcgaggccgcgag
cgagaccaccaccgaaacggaagtagtcaccccgacaatgggcaccacggcaacaacagc
cgcccaaatcctcatcctcatcatcaccaacagcagcagcagcagcagcagcagcagcag
cagcagcagcagcccagtcgtcacatcagcttccaccagcatcgtcccagcagcccccct
cagtcttttggcatcctccctcgggcggcggagtccggagtcacggttcaacaccacgtc
caggtccgaggcccgtcctcgccaccgccatttcaggttggccagcgggtgtgtttcccc
ctggaggacagtgtgtgtggaggggaggtgcgttactgcggcctcctgcccggccggtcc
tcatctgggatgtacgtcggagtcctgctggacactcctgccggtagctgggacgggttt
tataaaggagagaagctctgccacattccttcctctctgtatggacaccttctaccaatc
accaaggtctccgcagagtctaaatcccaccgtcacaaccctcttccccaaattcccaaa
tccatcctgaagcccgttcccccacccggcaccagacccgtccctttgtccccgcctccc
tctgctcccaaggtcgccctgatgcccccctccaaacaaccgctcaaacctcctccactg
ccgccgccgaaacccaccctcaaaccgctgccccccgtcccacctcccaagcctcacagc
cccacgtccctgaacaccaccgaccagccgcagcacaccaacggcgtgcacgggcctccc
tcgccgctgaggtcgccagacagcggcgaagcagcaggagaggacggagaggatggcgag
ctggaggtggggtcgatggttgaagtgaacgacccaccgctcttcggggtcattcgctgg
atcggacggatcaacgggatttcggcgcaggtggcgggaatcgagctggaccaggagctg
tctgcaggaacagacggcagctacctcggcgagcgtcacttccgttgtccgcccaacaag
gggctgttcgtcaagcttcgcaactgcaggcgggactcgcggttccccgcccccgagacg
cccgtcaatcaagtggagcgatgcaactctatagccttcgcagagtggggcagcgagcgc
gtggacgagcacacaccgcccgtggacggagaggaagccagcgagctgtacgagggccgg
aagagaggcatccagggccacctcaactcctgctacctggacgccacgctgttcagtctc
ttctcctgctgcagctcggccgactgggtcctgttttggccctctgacactgagaaggac
caaacctccggtcaggctcaggacctgctgcgatgcgagatagtcaaccccctgagaagg
tacggctacgtgtgtgccagtaagaccatggcgctgaggcgactgctggaggctgcgaac
agcaacacgggcttcaccaaccaggagaaagatcctgaagagttcctcaacaagcttttc
cagctcctccgtgtcgagccactcctcaagatcagatcgatgagccagcagcctcaggag
tgtcacctgtaccagctcttcccgccgaccctccctccctccccctcttcgcccctctcc
ccagtcgagtcccccatccccctcctggcctccccgtcgcccagtcggatgagggtcgcc
agcgtccaggcgctgctggagtcctccttcctccacgccggcctcaagtttgtcgaggct
ccctcctgcctcttgctgctcatgcctcgcttcggaaaggacttcaaaatgtttgacgcc
atcttgccctcgctgagtctggacatcacagacctgctggacgacactttgaggcagtgc
agcatctgtcaggctgttgcagagtgggagtgtctccagtgttacgaagacttggacatc
actccaggtcgtctcaaacagtactgccagacctgcaacacacaggtccacagtcacagg
aagcgagagtcccacatcccggtgaaggtgtccgtccccggtggaccgtggacgggccct
ctgcactgcacccgccagcggatgtctctcttcgcggtgacgtgcatcgagaccagccac
tacgtgagcttcgtcaagcacgggcctctccccacagactggctgttctttgacagcatg
gcagacagagaaggtggcgagaacggcttcaacatcccccaagtgaaggtgtgtccagag
gtgggccgctacctcagcctgtcgcaggaggagctgagcagagttgatccctcgtcctta
cgggagagcgcccgccgcctgctctgcgactcctacatgtgcctgtaccacagcccagag
ctcagcctgtacaagtga
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