Acanthopagrus latus (yellowfin seabream): 119027258
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Entry
119027258 CDS
T08233
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119027258
Membrane trafficking [BR:
alat04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119027258
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_7
TPR_10
TPR_8
SH3_1
TPR_16
SH3_9
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
119027258
NCBI-ProteinID:
XP_036968162
LinkDB
All DBs
Position
10:13373805..13432361
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AA seq
1355 aa
AA seq
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MSAGSDQDDGSRGSRRKICEDGQQHPEAAEEFNSNAASLKRTLSTCEENIPTALPMLLDV
VRGPECLPADEELQEMLRGKLRILQSDSIEVSSLFTELSTHLISINSEEKVIFVTFKTSE
EIWKFTTYYTIGFLGQCLENLLFDHKYWLSFLEEDITIKVSVQEDKLNLIYKGILMQEGS
FFAVCSTNQMFDSSTSGGDLYLEQGDIAQFEPPFLGSGWTVRCLANGARGTAPKPALEPI
NPFHQWFLKSGAESILVGDGKPACDFPLQFARGTCVATMAYDAEGPDELSVAPAERIIIE
GLLVSCFDWFTGRKESTGEVGLVKTSLVKPSTDTCNSADIFLDGEKSTFFSLQEDKVTKK
TITLLKKTSQNDTGHNYKLDVISYQDFEKKKSLSSSSKVDTKRSDLKRDIQMILDQRKDS
DSVFTMNGTLDDSVLATEAKNPSLPCFTVHPVIEGNDNTENFIPLFSFLEGQDYKAEFGI
LYGLSSEILASSTFTGHSEEDELIAFLGVARETARKKRLFWSQTRLCFLLGKLCAGRSKF
SQARVYFEEALSVPQEGLMDVRLVASIYSNLAAIYLLQKNTQSFFVLTERLVALLLGIPD
CLESLEDNFALKYILKKAILSHNKMAEARACHLLAKHHWARAEGVQAVPYLERLLVLCAG
AQGTWSISPSHGYLTLGKLYSELRLPHLSVTSARKASLQPSTLTDCLSSIVLALNSLSRL
YGITEQGAAASPQMAPYLHQALSFTQVQGGACDQHHVLHYQLTVSLCQIFCKHSMVGQAI
CRMHTFINSNPLSQQLTICIPERKSVLIWLAWLHIDNNEPDVALDILDSVLASMPEHCTI
PLEGVVLNMRGVALRCIGDLRRAAESYQAAVDICQEYEDMANWAVAQANQGLLCLKAGAK
GLAESHLTEAVQLFSELDEGHEADFITVLLKLGQHYVKQHQLHYGKACYEWALLLAINSN
LFDCQLTVTRHLCNLYGCDSPDQAQCIIYNKYLVKLLRCTGDREQEGDALKAISQLYLNL
GTERAYRAALDYTKSSLGIFIDLGFREKEAYGWLQAGKIYHLLDQTELVDLYVQVAQDVA
ISTGDTKFLLKLLEAAGDIFFNNCQDRDKAITFYRDHALPIAEKSSCVHTRLRLCNKLTE
LMHNLKLYEEAVEFALTALDISITLGEHLNERVVYHRLASLYHCLDQYELAEHYYLKTLT
VCPTPLLFDEETLYYVRVYQTLGDIMFYNLKDPFDAAGYYHLALAASMDLGNKRSQLQLC
TRLATIYHNFLIDRELSLIFYQKARGFAAELNTSQTVKTIRKAPGETELAEVKIKLKKRT
LQEMELDLEIKCRTLRKLDLEIQKLEREDPMRTAK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccggttcggaccaagacgatggcagccgcgggtccaggaggaaaatctgtgaa
gacggccagcagcacccggaggctgcggaggagttcaacagcaatgcggcaagtctgaag
agaactctatcaacatgtgaggaaaacatcccaacagctctgcccatgctgttggatgtg
gtcaggggtcctgagtgtcttcctgcagatgaggagttgcaggaaatgctaagagggaaa
ttgcgcattctgcaatctgacagcatcgaggtcagctctctattcacggagttgtccact
catctcatctcgattaacagtgaagaaaaagtcatctttgtgactttcaaaacatctgag
gaaatttggaagttcaccacatattacaccataggcttcctgggtcagtgtttggagaat
ctgttatttgaccataagtattggctcagttttttggaggaagatatcactattaaagtt
tcggttcaggaggacaaacttaacctaatatacaaaggcatcctcatgcaggaagggtct
ttttttgctgtttgtagtacaaaccagatgtttgacagctcaacctctggaggtgacctg
tacctggagcagggagacatagcccagtttgagcctcccttcctgggctcagggtggact
gtccgctgccttgctaatggagccagaggcactgcacccaaacctgctcttgagccaatc
aacccttttcatcaatggtttctcaaatctggtgcagagagtattttagttggtgatggt
aaacctgcctgtgacttccctctgcagtttgccagaggaacctgtgtggccacaatggca
tatgatgctgagggcccagatgagctgagtgtggcaccagctgaacgcatcatcattgag
ggtcttctggtgtcttgttttgattggttcacaggaaggaaggaatccacaggagaagtg
ggtctagtcaagacaagtctggtgaaaccatccactgatacttgcaactcagccgatatt
tttttggatggagaaaaatcgacatttttcagtttgcaagaggataaagtcacaaagaaa
acaattaccttattgaagaagacatctcaaaatgacactggtcataactacaaactggat
gtgatcagttaccaagactttgaaaagaaaaaatcactcagctcttcaagcaaagttgat
actaagcggtctgacctgaagagagatattcagatgattcttgatcaaagaaaagactca
gattccgttttcaccatgaacgggactctagacgactcggtcttggctacagaggcaaaa
aacccaagccttccctgtttcacagttcacccagtcatagaaggaaacgacaacactgag
aacttcattccccttttctcttttttggagggccaagactataaagcagagtttggcatc
ttgtatggactgagttctgaaatccttgcctcctccaccttcactggccactctgaagag
gatgagctgattgccttcctgggtgttgctcgggaaacagccaggaagaaacgactcttt
tggtcacagactcgtttgtgctttctgttgggtaagctctgtgctgggaggtcaaaattc
agccaggcacgggtttactttgaggaagccctcagtgtgccacaagaaggcttaatggac
gtcaggctggtggccagtatctactccaatctggctgccatatatcttttgcagaaaaat
actcaaagtttctttgttctgacagagcgacttgttgccttgctattaggaatcccagac
tgcctggaaagcctggaggataattttgctcttaaatacatcctcaaaaaagctattctt
tctcacaacaaaatggcagaggcccgggcttgtcacctattagcgaagcaccactgggct
cgtgctgagggggttcaagctgttccttatcttgagagactacttgttctttgtgctgga
gctcaaggaacttggagtatctctcctagtcatggatacttgaccctaggaaagctatac
agtgaactccgactaccccaccttagtgtcacttcagccaggaaagcttctctgcagcca
tctacgctgactgactgccttagcagcattgtactagctttgaacagcctcagcagactg
tatgggatcacagaacagggagctgctgcctcacctcaaatggctccatatttacaccaa
gccctcagttttacccaagtccaaggaggagcatgtgaccaacatcatgttttgcactat
cagctgacagtttctctctgccaaatcttttgcaaacacagcatggttggacaggctatc
tgccgtatgcatactttcatcaacagcaacccactttcacagcaactcaccatttgtatc
ccagaaagaaagagtgtcctgatctggctggcatggcttcacattgacaacaatgagcca
gatgttgctttggatatcctggactctgtcctagcttccatgcctgaacactgcacgatc
cctctggaaggtgtggtcctgaacatgcgaggtgtggcacttcgatgcattggtgacctc
cggagggcagcggagagctaccaggctgctgttgacatatgccaagaatatgaggacatg
gcaaactgggctgtagctcaggctaaccaagggctattatgtctgaaggctggagctaaa
ggactagcagagagtcaccttactgaggctgtgcaactcttctctgagctggatgaaggt
catgaggcagacttcattacagtgctgctgaagctgggacaacactatgtgaagcagcac
cagctgcactatggaaaggcatgctatgaatgggccctgctgttggctataaattccaac
ctgtttgactgccagcttactgtaaccagacacctttgtaatctgtatgggtgtgatagt
ccagaccaggcccagtgtattatttacaacaaatacctggtcaagctgctgagatgcaca
ggagacagagaacaggagggagatgcgctgaaagccatcagccagctctacctcaatctg
ggcacagaaagggcgtaccgggcagctcttgactacaccaagagcagtttgggtatattc
attgacctgggcttcagagagaaggaggcatatggctggctgcaggccgggaagatctac
cacctgcttgaccagactgaactggtggacctatatgttcaggtagctcaggatgttgcc
ataagcacaggagacaccaagttcctccttaaacttctcgaggcagcaggggacattttc
ttcaacaactgccaggaccgggacaaggctatcacattctacagggaccatgctctgcct
attgcagagaagagcagctgtgtgcataccaggctgaggttgtgtaataagctgactgaa
cttatgcacaacctcaagttgtatgaggaagctgtggagtttgctctgactgcactggac
atcagcatcactctaggtgagcatcttaatgaacgtgtggtttaccaccgtctggcttct
ctgtaccactgtctggaccagtatgaactggcggaacactattacctgaagaccctgact
gtctgcccaacacctctgctgtttgatgaggaaacactgtactatgtcagggtgtaccag
acactgggggacataatgttctataatctgaaggacccatttgatgctgcaggttactac
cacctggcacttgctgcatccatggatctgggcaataagaggtctcaactgcagctgtgc
acccgcctcgccaccatctaccacaactttctaatagaccgggagctctctctcatcttt
taccagaaggcaagaggatttgcggcagagctgaacacttctcagacagtcaagactata
cgcaaagcacctggagagacagagctggcagaagttaaaatcaaattgaagaagagaacg
ctccaagaaatggagctggatcttgagattaaatgccggacactcaggaaactggacttg
gaaatccagaaactagaaagagaagatccaatgaggactgccaaataa
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