Acanthopagrus latus (yellowfin seabream): 119027267
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Entry
119027267 CDS
T08233
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119027267 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119027267 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119027267 (pcdh7b)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119027267 (pcdh7b)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119027267 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
119027267
NCBI-ProteinID:
XP_036968181
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All DBs
Position
10:8823710..8941361
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AA seq
1255 aa
AA seq
DB search
MRTTGAVDYLYYCVLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGSPILQLKAT
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPVFSQNVVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGQNAEMSLFIEEEEEIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTVVDAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDARPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTTPQQPKLSTFMSGSGSGSSSAEQPGSQETLAMAAMANGDPTSAHMMGDRNRNLLNKKM
ASSSSSYEAFGSPSYGSPGSGEETLGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcgtgctcatcctgcagctcgtg
catcagcccgctgccaagcaagtgctccggtaccgtttggccgaggagggacctgccgat
gtcagggtggggaacgtggccggcgacctgggcatcgtggccgggtccggcgaggtgaca
ttcacgctggagtccggctccgattttttcaaaatagacaacataacaggtgagctcacc
accaacgagaggcgcatagaccgggagaaactacagcagtgccaaatgatatttgatgaa
aatgagtgttttatagattttgaggtgtcagtgatagggccggctcagagctgggtcgac
ctctttgagggaaaagtcatcatactagacataaacgataacaccccgtccttcccgtcc
cctgtcctgacactgtctgtggaggagaacagacccattggaaccctttatctgctgccc
acagccacagacagagattttggcaggaatggaatagagcgatacgagcttatccaggac
aatggggagaactcaaggcgcctgggctcttctggggattcatactcggggaagaggagg
tttgatgaaggcgcgagcaggagcagcgtctttgaactgcaagttgctgacaccactgat
ggagagaagcagcctcagctcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctcacactgcgcgtgagggatggaggagatccccctcgctcctcccaggccatt
ctgagggtgatgatcactgatgtgaatgacaacaacccccggttcgagaagagcgtgtat
gaggctgacctgccggaaaacagctcccccggttcccccatactgcagctcaaagcgacg
gatgcagacgtgggggttaatggtcaaatagagtatgtgttcggggcagccacagagtca
gtaaggaggctgctgaggttggatgagagcacagggtggctgagtgtgttgcaccgcatt
gaccgtgaagaagtgagccaactgaggttcacagtaatggcccgcgaccgaggccagccg
ccaaaaatggacaaggccaccgtggtgttgaacatcaaggacgagaacgacaacgtcccc
gccattgagatcaggaagattgggcgcattttcttaaaagacgggatagcgaacgtggct
gaggacgtggtggtggacacacccatcgccctggtccaggtgtcggaccgcgaccagggg
gaaaacggcatcgtgacgtgcaccgtggtgggcgacgtgccctttcagctgaagccagcc
agtgagatggagggtgagcagaacaaaaagaaatacttcctccacacatctgcaccgctg
gactatgaggccacacaggaatacaatgtggtcatagtggctgtggactctggaagcccc
agcctggcgagcaataactctcttatcgtcaaagtgggtgacactaatgacaaccctcct
gtcttcagccagaatgttgtagaggtgtcgtttccggagaacaatgcccctggcgagagg
gtgacaacagtggcagccattgacgcagatagtgggaagaacgccgaaatagcctattcc
ctggactcatcggtaaatgggattttctctatcgatgcagacagtggagacatcagagta
aacaccattctggatagagagcaaactgagcgctacgaattcaaagtgatagccaaagat
aagggcataaacacccttcagggctctgcaacagtggtcgtccttgtggccgataagaat
gacaacgaaccaaagttcatgcaggacgtgtttaccttctatgtcaaggagaaccttgag
ccaaacagcccagtcggcatggttacagtcattgacgcagataaaggccaaaatgcagag
atgagtcttttcattgaggaagaggaggagatcttttcaattgagaatgacacagggact
attttctccaccctctccttcgaccgagagcagaaaactacgtacacattccgcgtcaaa
gccgtggatgggggtgaccctcccagatccgccacggccacagtttcactcttcgtcatg
gatgaaaatgacaacgcgccaacagtcacgttcccaataaacagctcctacacccttctt
cctccctccagcaacatcagaacagtggtgagaacagtcatcgccaccgataccgacact
ggcatcaacgcagacctgaactacagcatcattggggggaaccccttcaagctgtttgag
attgatgggggcaccggggtcatttctctggtggggaagttggagcagaagcactatggc
ctccacagactggtggtccaggtgaatgacagtgggcagccttcacagagcaccaccacg
ctggtccatgtgtacgtcaacgagactctttccaactccacagttgtggacgcccaggtg
gctaagagcctgagcacgtctctcaacaccaacattgccggcgacccaaactatgatttg
agcaaacagcggctaagcatcgtaattggggtcgtttcgggcatcatgaccgtcatcctt
atcatcctggttgtcgtcatggcccgttactgccgccccaagaacaagaatggctatgag
gccggcaagaaggaccacgaagacttcttcacaccacagcagcacgataagtccaagaag
cccaagaaggataagaagaaacagaagtccaagcagccactctatagcagcattgtcact
gtagaggcctccaaacccaacgggcagcgctacgacggcgtcaacgagaagctgtcggac
agtcctggcatgggccgctaccgttcagtcaacggagggccggggagcccagacctggcc
cggcactacaagtccagttcaccactccccactgtccagcttcacccgcagtcgccgaca
gctggtaaaaagcaccaggcagttcaggacctgccccctgccaacacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagtggcctggatgagtcggagacg
cccagcagcaagagttcgtcgggcccccggctgggcgccctcccccttcccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgacgcc
cggcctttgcctgacgtagccatgactggcaagtgcacccgggaatgcgacgagtacggc
cactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccatccaagtca
accaccaccccacaacaaccaaagctttccactttcatgagcggcagcggaagcggcagc
agcagcgcggagcagcccggcagccaagagaccctcgccatggccgccatggccaacgga
gaccccacctccgctcacatgatgggcgaccgcaatcgcaaccttctcaacaagaagatg
gcctcctcctcctcatcctacgaggccttcggctcgccttcctacggctcgccgggaagc
ggggaggagacgctgggccaccccactgaggagatcccactggcacctaccggggagtac
aagcccacgtcctgtggcactctgacgcgacgggaggtgtacctgtga
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