Acanthopagrus latus (yellowfin seabream): 119027278
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Entry
119027278 CDS
T08233
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119027278 (gigyf1a)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119027278 (gigyf1a)
Surveillance factors
Other surveillance factors
119027278 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
119027278
NCBI-ProteinID:
XP_036968212
LinkDB
All DBs
Position
10:16872161..16897134
Genome browser
AA seq
1090 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVGGAAPAGVVRGRG
ATRGGRGRGRGEGGFYQRSIEEPEVGFGRSVREIHRSQSWDDRGERRFEKPLRREVGRPA
FEESAGPGGPGRKEYTRADSDNWRTLREEQDEEEGVEPGSSWRLTGPRRDDGGPRSAGWR
DHAAPGESRRRKFDFDFRDSEGHGSGRRRAGSDGLEDDRDGLPEWCTDEEDGEMGTFDSS
GAFMPMKKGGKETILEEEFEFKGIEEEEEEESFTDMERNSAEGDKEKESKEAGSAVGDGE
TKPASPSSSPPVQCTPPFVEPRSSNAGLVVDNPQLNNSHPVKASSTPSEDVAPVGGSKTQ
LGPSVVASSSLPPPPPSSAAPLLPPSGGDTEDDEGMKHLQQEAEKMVASLQDTSLEEECF
TQALQQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMTLLV
KRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQPPPTQRPQPTRGPAGTVSQSSANV
EDGEGRMQRRGKIDRQVTGNLDQERLKKQQELAAAAALYQQLQQQQLFQLINRCSEQGMI
SRSMSVPDTGSMWDMHTSASQPSGSEASLWDLTMNPSTQGPTLEQLQKLQQERRDAELRA
KREEEEQRKRREEKRRQQEEQKRREEEELFRRKQCRQQQELIMKLLQQAPQQQGPGAGSS
GWSGAPSSGLAKAGKPPALALLEMQQEAERLLKQQQQQRAQQRERHSGMSMGSSSMGGQW
VDGVGMWGGPGGMEGKGGSGGSSGSMGMWDEAVKNQSGLRGNSNNNMGLKNSRSSPSLSD
QYMMRRKRTDEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVAYLK
EVESPYAVLDFIRCYLGDTVEAKEFAKQFLERRAKQKANQQRQQQLSKDVSGLNMNFPLQ
DSMRGMNPSALQSMFQANHMGKAGLYDNQGGKMKKKQPMMLHSDPSILGYSFHNAGECLS
LNEMEMVEDY
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacacttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacgtccccccctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccactggcactggtg
cctctcactgaggaggagcagaggaacttctccatgtctgtgaacagtgtggcggtgctg
aggctcatgggaaaaggggtgggtggggccgccccagctggagtggtccgaggacgaggg
gccacgcgaggtggtcgaggacgaggtcgtggtgaaggtggattctaccaaagaagtatt
gaagagccggaggtgggttttggccgcagcgtccgagagatacaccgcagccagagctgg
gatgaccggggcgagcgtcgttttgagaagccgctgcggcgggaggtggggcgtcctgcc
tttgaagagtcagcaggtcccgggggtccggggaggaaggagtacacaagggctgacagc
gataactggcgcaccctccgggaggagcaggacgaggaggagggggtggagccaggcagc
agctggagacttactggaccccgcagggatgatggtggtcctcgctcagcaggctggcgg
gaccatgctgctccaggtgagagtcgtcgtcggaagtttgatttcgacttccgggactcc
gagggtcatggcagcggccgccggcgtgcaggcagtgacggacttgaggatgacagggat
ggcctgcccgagtggtgtacagatgaggaggatggagagatgggcacttttgactcgtct
ggagctttcatgcctatgaagaagggtggcaaggagacaatcctggaggaggagtttgag
tttaaggggatagaggaggaagaagaggaagagagcttcactgacatggaaaggaacagt
gctgaaggagacaaagaaaaggagagtaaagaagctggctctgctgtaggagatggtgag
acaaagccagcatcaccctcttcttctcctccagtccaatgcacccctccctttgtggag
cctcggtccagcaatgctgggcttgtggtggacaaccctcagctgaacaacagccaccct
gtcaaggccagcagcacacccagtgaagatgtggctccagtagggggctccaaaacccag
ctgggcccaagcgtcgttgcctcctccagcctgcctcccccacccccttcctctgctgct
cctctcctccctccatctggaggagacaccgaggatgatgagggcatgaagcacctgcag
caggaggcagagaagatggtggcatcactgcaggatacttctttggaggaggagtgtttc
acccaggctctgcagcagcagcaggagagcagaaacacagcagctgctctgccgctgtca
catgaggctgcgatgaagtggttctacaaggacccgcagggagagatccagggccctttc
accaccgtggagatgtgcgagtggttccaggctggttacttcaccatgaccctgctggta
aagcggggctgcgacgagggctttcaacccctgggggacgtcatcaagatgtgggggcgc
gtcccctttgccccagggccctccccgccccccctgctggtgagacagccaccaccaacg
cagcgcccgcagcccacccgggggcccgccgggactgtgagtcagagctcagccaacgta
gaggatggggaagggaggatgcagaggagagggaagattgatagacaggtcacgggaaac
ctggaccaggagcgcctgaaaaagcaacaggagctggcagccgcagcagctctttatcag
cagctccaacagcagcagctattccagctcattaacaggtgcagtgagcagggtatgata
agcagatcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttca
cagccgtcaggcagtgaagccagtctttgggacttaacaatgaatccttctactcagggt
ccaactctcgaacagcttcaaaagctccagcaggagaggagagacgctgaactcagggcg
aagcgtgaggaggaggagcagcgtaagaggagggaggaaaagaggaggcaacaggaggag
cagaagaggagggaggaggaagagctcttcagacgcaagcagtgtcgtcagcagcaggaa
ctgatcatgaaattgctgcagcaggcccctcagcagcagggtcctggggcaggcagctca
ggctggagcggggctccctcctctgggctcgccaaagcaggaaagcccccggctcttgct
ctgctggaaatgcagcaggaggcagagaggctcctgaagcagcaacagcaacagagagcc
cagcagagagaacgccactctggcatgtcaatggggagctcctccatgggagggcagtgg
gtggatggtgtcggtatgtggggcggtcctggaggtatggagggcaagggtggcagtgga
ggctcctcaggcagcatgggcatgtgggacgaggctgtgaagaaccagtccggcctgcgt
ggcaacagcaacaacaacatgggcttgaagaacagtcgcagcagtccttcactcagtgat
cagtacatgatgcgtcgtaagcggactgatgaggaggagaagctgctgaagctgctgcag
ggcatgaagcctcaggacggcttcaccacctggtgtgaacagatgctgcacgctctcaac
acctctgccaacaactcctcctcctctctggatgttgccacgattgtggcatatctgaag
gaggtggagtctccctatgcagtgctggacttcatccggtgctacctaggggacacagtg
gaagccaaagagttcgccaaacagtttctggagcgacgtgccaaacagaaagccaaccaa
cagaggcagcagcagttatcaaaggatgtgtctggattgaacatgaacttccctctgcag
gactcaatgcgaggtatgaatccaagcgccctgcagtccatgtttcaagccaaccacatg
ggcaaggctggtctctatgacaaccagggggggaagatgaagaagaaacagcccatgatg
ctgcactctgaccccagcatcctagggtactcattccacaatgcgggcgagtgtctgagc
ctgaatgagatggagatggtggaggattactga
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