Acanthopagrus latus (yellowfin seabream): 119027441
Help
Entry
119027441 CDS
T08233
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119027441 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alat03021
]
119027441 (taf6l)
03036 Chromosome and associated proteins [BR:
alat03036
]
119027441 (taf6l)
Transcription machinery [BR:
alat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119027441 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
119027441 (taf6l)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119027441 (taf6l)
STAGA complex
119027441 (taf6l)
TFTC complex
119027441 (taf6l)
SAGA complex
119027441 (taf6l)
SLIK complex
119027441 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
119027441
NCBI-ProteinID:
XP_036968531
LinkDB
All DBs
Position
10:13022148..13032230
Genome browser
AA seq
646 aa
AA seq
DB search
MADREERRFAEVSRESVKLVAEGAGVELGDDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSNVEAICGYGAQDALPFRSVKEGELFFIEDRDINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPTAVQSLSDELLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSQPVEGGSSGLPATVVGAVGYRVSSPGLSPPPEPLSEAALGIASH
LQAGGAGCPWEEWTPVPLPAMYCELYSFFGDSLAVRFSTGPDFGSFPTCTPSQLRDARKE
APGNASNPDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLAVTGAARALARSSSSSSSSS
SSSMQRSRSSSSRSGQRSAGLSRDVFPKARFTSPQIGPPAFTFIIGGRQMGRRCQGRRPF
QTTFAPTPPLSAIPPRAYAHKLPVIGRVGKPVRRWACSHYSLHLPL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgccgcttcgccgaggtctcccgggagtctgtcaaactcgtg
gccgaaggtgcaggcgtggagctgggcgatgatgtggctgctctgctggctgaggacgtg
tgttaccggctcagggaggcgacacagagcagctctcagtttatgagacatgccaagagg
aggaagctgacagtggaggacttcaacagagctctgcgctggagtaatgtggaggccatt
tgtggctacggggcccaggatgctcttcctttccgttcagtcaaagaaggagagctattc
ttcatcgaggatcgggacatcaacctggttgagttggctctggccaccaacattcccaag
ggctgtgccgagaccatggtacgagtgaatgtgtcatacctggacgggaaaggtaacctg
gagcctcaggggacagttcccacagcggtgcagtctctgtcagatgaactgttgaagtac
taccagcagatcacacgggcaatccttggagaggacccccaccttatgaaggtggctctg
ctggacctccagtccaactccaagattgctgccctcctgccatactttgtttatgtcatc
agtggggtgaagtcagtaagccatgacctggagcagctcaacaggcttctccacatggtg
aagagcctggtccagaacccctacctgtacctgggctcatacgtgcgcagcctggtctcc
agcgtcatgtactgcatcctggagccgctggctgcctccatcaacccgctcaatgaccac
tggaccctcagggactacgcagccctgctcctcagccacatcttttggacccatggggat
ctagtgagtggcctctaccatcagatcctgctgtcgctccagaaggttctgtctgaccca
gtgagacctctttgctcccactatggagctgtggttggacttcatgctctgggatggaag
gctgttgagagagtgctcttcccacatcttcctgcctactgggccaacctccaggctgtg
ttggatgactactctgtttccaatgcccaggtcaaagcagatggacataaggtctatgga
gccatcctggtggcagtggagcgcctgctgaagatgaaggctctttctcagccagtcgag
ggaggctccagtggtctgccggccactgtggtgggtgctgtgggttacagggtgagctcg
cctggcctcagcccccctccagagcccctgtcagaggctgccctgggaattgccagccac
cttcaggcaggtggggccggctgtccctgggaggagtggaccccagtccctctgcctgcc
atgtactgtgagctctactccttctttggcgacagcctagctgtcaggttcagtacggga
cctgactttggtagcttccctacctgcaccccatcccagctcagagatgccaggaaggaa
gcccctggtaatgcctccaaccctgacaccacccgaaagatgccacagctgactgccaac
ctcaacattagccctagacaggacgggagtcctcgcaccgatccacccccacccagcctg
gcagtgactggagcagcaagggccctggctcgctcctcctcctcctcctcctcctcctcc
tcctcttccatgcagcgttccaggtcttcctcatcacgttcgggccagcgttcagcaggt
ctgtctcgggacgtgttccctaaagctcgcttcacctctcctcagataggacctccggcg
ttcaccttcatcatcggtggtcggcagatgggtcgacgctgccaaggccgccgccccttc
cagacaacttttgccccaactccacctctttcggccatcccaccacgtgcctacgcccac
aaacttcctgtcattggcagagttggcaaaccagtacgccgctgggcctgttcccattac
tcccttcatctacctctctag
DBGET
integrated database retrieval system
