Acanthopagrus latus (yellowfin seabream): 119027529
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Entry
119027529 CDS
T08233
Symbol
atg4da
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04136
Autophagy - other
alat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119027529 (atg4da)
04136 Autophagy - other
119027529 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119027529 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119027529 (atg4da)
03029 Mitochondrial biogenesis [BR:
alat03029
]
119027529 (atg4da)
Peptidases and inhibitors [BR:
alat01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
119027529 (atg4da)
Membrane trafficking [BR:
alat04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
119027529 (atg4da)
Mitochondrial biogenesis [BR:
alat03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119027529 (atg4da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
119027529
NCBI-ProteinID:
XP_036968734
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All DBs
Position
1:17138186..17147037
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AA seq
497 aa
AA seq
DB search
MNSISPSAAQYVGGVMQDELVESRRQQPPERQGSFGLRLPQTPDPSRETTGEPDEMDKLK
AKLMSAWNNVKYGWTVKSKTSFNKISPVTVLGHSYLLNSEDEVDRFCLAFVSRIWLTYRR
EFPQLEGSTWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWAWPDAQQLTDVDFEVFRPRS
PARAGGVPIPSFGSPRGSSATEKPLPNDQPPRCSQRKRPESAREAEPIHHRLVTWFGDQP
SAPFGIHQLVEIGKSSGKKAGDWYGPSIVAHILRKAVARATAVHNLVVYVAQDCTVYKED
VVHLCDLSRSQTPPDPSSQAWKSVIILVPVRLGGEALNPSYIECVKNILKLDCCIGIIGG
KPKHSLYFVGFQDEQLLYLDPHYCQPVVDVSQVNFPLESFHCSSPKKMPFNRMDPSCTIG
FYAKNKKEFESLCSAVTEALSSSKEKYPIFTFVEGQGQDYGLEGHSSNRSGPAAHILPPG
NQFRSNNRRNSDEFVFL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaactccatttcccccagcgcagcgcagtacgtcgggggagtgatgcaggatgagctg
gtggagagccggaggcagcagccccccgagcggcagggcagcttcggtctccggctgccg
cagacaccggatcccagcagagagacaacgggagagcctgatgaaatggacaaactgaag
gccaaactgatgtcagcatggaataatgtcaaatatggttggactgttaaatctaaaacg
tccttcaacaagatctcaccagtcactgtcctaggacattcctatctgctcaacagtgaa
gacgaggtggaccggttctgtctggctttcgtgtccaggatttggctgacctacaggagg
gagttccctcagctggagggttccacctggaccacagactgcggctggggctgcatgctg
cgcagtgggcagatgctgctggcacaggggctcctggtccatttgatgcccagagattgg
gcttggccagatgctcagcagctcaccgatgtggactttgaggtgtttcgaccgcgctcc
ccagctcgggctggaggggtccccatcccatcctttggctctccacgaggatccagcgcc
actgaaaaacctctgccaaatgatcaaccaccgagatgcagccagagaaagagaccggag
tctgcgagggaggccgagcccatccatcacaggctggtcacctggttcggggatcagccc
tctgcaccgtttgggattcaccagctggtggaaatcggcaaaagctcagggaagaaggct
ggtgactggtatggtccctctatagtggcacacatcctacggaaagcggtggccagagca
actgcagtccacaacctggttgtatatgtggctcaggattgtacagtgtacaaagaggat
gtggtgcatctctgtgacctgtcacgcagccagacgccccccgatccgtccagccaagcc
tggaagtctgtcatcatactggtgcctgtacggctgggaggggaggccctcaacccgtcc
tacatcgaatgtgtcaagaacatccttaagctggattgttgtattggaatcatcggaggc
aaaccgaagcattctctttacttcgttggctttcaagatgagcagctgctgtatctcgac
cctcactactgccagcctgtggtggatgtgtcacaagtcaacttcccactggagtcattc
cactgtagctctcccaaaaagatgcccttcaaccgcatggatcccagctgtaccatcggc
ttttacgccaagaacaagaaggagtttgagtctctctgttctgctgttactgaggccctg
tcatcgtcaaaggagaagtaccccatctttaccttcgttgagggccagggtcaggattat
ggacttgagggtcacagcagcaatagaagtggacctgctgcccacatcctgccccctgga
aatcagttcaggagtaacaatagaagaaacagtgatgagtttgtcttcttgtag
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