Acanthopagrus latus (yellowfin seabream): 119027614
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Entry
119027614 CDS
T08233
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119027614 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alat03041
]
119027614 (sf1)
Spliceosome [BR:
alat03041
]
Complex A
Other components
Complex A specific factors
119027614 (sf1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
119027614
NCBI-ProteinID:
XP_036968876
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All DBs
Position
10:complement(12765868..12778162)
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AA seq
678 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMPTPGPPASFPPLQGFQPAMPNASFPS
LQFNPGTGFSTQVPQPPAAGGGLAKPDFNQKKQRKKSRWSSETPDQKTVIPGMPTVIPPG
LTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRK
KIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNT
LKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIR
NILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNAEPRSITNTTLCTKCG
GAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHSS
SQGGGPRASGPNNNQPPPQNRPPWMSSGPTENRNFHGMHGGPGGHGGPHNFPPPMPNMGG
PPMPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMGMMPPPPPPPSNQPPPPPSG
PLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPGTGTLPPWQQPQQPAASGAQPPPP
MGTPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYAPPPPPPPMDPSNFVTMMGMGVP
GMPPFGMPPAPPPPPPQN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcaaacgcaactcctttagggaagttgcatcccagtattggcgctaaa
cgaggatttgacgccgggcctggtgcggggaacgggttgatgccaacaccggggccaccc
gcatcctttcctcccctccaaggtttccagcccgctatgccaaatgcatcttttccgtca
cttcagtttaatccagggacaggtttttcaacccaggtaccgcagccaccagctgcaggg
ggcggactggcgaaacccgatttcaatcagaaaaaacaaaggaagaagagtcgatggagc
agtgagacgcctgatcagaagactgtaatacccggtatgcccactgtcattccccctgga
ctgacccgggatcaagagagagcctatatagtccaactgcagattgaagacctgactcgt
aaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctctcca
gagcccatctacaacagcgagggcaagaggttaaacacccgcgagtatcgcacacgcaag
aagattgaggaagagcgtcattccctcatcactgagatggttggactaaacccagacttc
aagcctcctgcagactataagcctccagctaccagagtcaacgacaaagtaatgatcccc
caagatgaataccctgaaatcaactttgttggtctgctaattgggccacgtggtaataca
ctgaagaacattgaaaaggagtgttgcgccaagatcatgatccggggaaaaggttctgtg
aaggaggggaaggtaggccgaaaggatggccagatgctgccaggggaggatgagcctctg
catgccctagtcactgccaacaccatggagaatgtcaagaaagctgtggagcagatccgg
aacattctgaagcaaggcattgagacacctgaggatcagaatgacctacgaaagatgcag
ctgagagagctggccagactcaacggcacgctgagggaagatgacaacaggattcttcgt
ccttggcagaacgctgaaccacgcagcatcaccaataccaccctctgtaccaagtgtggt
ggagcaggccacatctcctctgactgcaagtacaccagctcctttgctgcccatagagca
acaggtggcgagcctcctcagtcggcccaggacaaggcacgaatggacaaggagtatctg
tctctcatggctgaactgggggaggctccagtccccacctctggtggaggacactcgagc
agccagggaggaggacctcgggcctcaggacccaacaataaccagccaccaccacagaac
cggcctccttggatgagctccggtcccactgagaacaggaacttccatggcatgcatggt
ggacctggtggccatggaggaccccacaacttccctccccccatgcctaacatgggaggc
ccacctatgccccccaaccctaatggcctgcctcccccctggatgcaaccccctcctcca
cccatgggccagggtccaggacctcatggacaccccatgggtctgcttccacctccaatg
ggcatgatgccgcctccaccacctcctcccagcaaccagccacctcctcccccttctgga
cctctgccaccatggcaacagcaagctccacctccccctccaaccagcagcatggcaacc
agtacaccactgccatggcaacagaataccaccaccacgtccagccctggcaccggcacc
ctgcccccatggcagcagccccagcagcctgcagcctcaggagctcagccccccccacca
atgggcaccccatccatggtgccacctcctcctggcgtccagcccccattgcccccaggc
gccccccctcctcctccaccaccacctccaggctcaaccggcatgatgtatgccccaccg
cctcccccaccacccatggacccttccaactttgtcaccatgatggggatgggcgtaccg
ggcatgccccccttcggcatgcctcctgcccctccacctcctccacctcagaattaa
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