Acanthopagrus latus (yellowfin seabream): 119028125
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Entry
119028125 CDS
T08233
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119028125 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119028125 (fip1l1a)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119028125 (fip1l1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
119028125
NCBI-ProteinID:
XP_036969584
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Position
11:7226248..7249948
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AA seq
440 aa
AA seq
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MVSDSESDSKVVTEDEDQEEQIYQWIYGMKTTCDKQEGEEDQILPSSSRPSPVHLKNIAE
GDDSEQEATHKTIQAERQKDQEGDNTVGSDMDALICIQQIPVLKAKVQEKPWLRPGADIS
DYFNYGFDEESWKTYCRKQLKLRTSSQKLYTQIMAENWKNTHGKKGSCSAYASSDSRTTH
ASRQSSAAIDVIGERPGRSSRVEGCTHLRIEGNNTQVLTKMSPEEGRITSNNVPHPSKVN
SLFAYTTHPAILYRQRPPPSSSHATFDSGYSKVFKPSTATSSGVPSLIPRGISTGVIETA
KAWECYIRQEMCDSYRGRTRQYGHDKESKRGRERDREDCSFSYNSGEKHMRPRETTERGH
KHQTPVSFNRKGEKWQRERRHTDKRGEPRSSCSSNRSRSNGGEDRDSQRRHRNKKAKRIR
KDKESSKVSSAEQERKLKCD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgactcggagtcggactccaaagttgtcactgaagatgaagatcaagaggaa
caaatttatcaatggatttatggcatgaagactacatgtgacaagcaggagggtgaggag
gatcaaatcctacccagcagctccaggccctcacctgtgcacctgaaaaatattgctgaa
ggggatgactcagaacaagaggcaacacataaaacaatacaagcagaaagacaaaaagac
caggaaggtgataatacagtgggatcagacatggatgcattgatctgtatacaacaaatc
ccagttctaaaggcaaaagtacaggaaaagccatggttgagacctggtgctgacatctca
gattacttcaactatggctttgatgaagaaagctggaaaacttactgtaggaaacagttg
aaactgcgtacaagtagtcaaaagctatacactcaaatcatggctgagaattggaaaaat
acacatggaaaaaaaggctcttgttctgcttatgcttcttcagacagccgaactacacat
gcctccagacagtcaagtgctgctattgatgtgattggagagcgacctgggcgcagcagc
agagtggaagggtgtacacatcttagaatcgaaggaaacaacactcaggtacttactaag
atgtccccagaggagggtagaattacttctaataatgtgccccatccgtctaaagtcaat
tctctctttgcatataccactcatccagctatcctttaccgacagaggccccctccttcc
tcttcccatgctacttttgacagtggatactctaaagtctttaaaccctcaacagcaact
tcatcaggtgtgccatccttaatccccaggggaatttccactggagtgattgaaactgcc
aaggcctgggagtgctacataaggcaggaaatgtgtgacagttacagaggcagaaccaga
cagtatggtcatgacaaagagagtaaaagaggcagagaaagagacagggaggattgttcc
ttttcatacaacagtggggagaagcacatgaggcccagggagaccacagagcgagggcac
aaacaccaaactcctgtaagcttcaacagaaaaggagaaaaatggcaaagagaaaggaga
cacacagacaaaagaggagagccaagatcctcatgcagcagcaacaggagtaggagtaat
ggtggtgaggacagagacagtcagcgtagacacagaaacaagaaggccaaaaggatcagg
aaggacaaggagagcagcaaggtgtcctccgctgagcaggagaggaaattaaaatgtgac
tga
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