KEGG   Acanthopagrus latus (yellowfin seabream): 119028142
Entry
119028142         CDS       T08233                                 
Symbol
kdm4b
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:alat03036]
    119028142 (kdm4b)
Enzymes [BR:alat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     119028142 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     119028142 (kdm4b)
Chromosome and associated proteins [BR:alat03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119028142 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD DUF4537 Tudor_5 Tudor_3 zf-RING-like
Other DBs
NCBI-GeneID: 119028142
NCBI-ProteinID: XP_036969616
LinkDB
Position
11:complement(19660080..19705038)
AA seq 1280 aa
MLEENRSREFLQSETKSIERNRARHYFAAGGLPATFKDPMATDMPMDTVPAPHPVPASHP
ENAPDSPPDLSPSAAQDQIPTQEPAIAETPETAGSSEHDSAPDLIPAQSIDQDVAPGLVP
GPDLPPPPLVPPVLPVPPASTKNPSCKIMTFRPTMEEFKDFAKYIVYMESQGAHRAGLAK
VIPPEGWKPRRSYDTIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVSEYRKLANSKRY
CTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIHEWNIGHLNTLLDMVEQECGI
VIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYAIPPEHGKRLERLAQGF
FPGSSQGCDAFLRHKMTLISPSILKMYGIPFDRITQNEGEFMITFPYGYHAGFNHGFNCA
ESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYELWKQGKDTAVLDHLKA
TELSSPELERWRQHRVTHRANLLRRAMQKMKQLRRLKLEEVKVLAEEGIELNAADYQRQV
EEREAQRRQEREERLAKEAMMTLEAMEREEQEAAEAAAKAAEAPAVEEPEAKPQNLMEDI
EKKKPKKPKKTTNTHNSITGFEEAFEQFATSNMKTSNNVSFAAEVAKPPIPKQSDIPADN
KLDVSATQACFSKMKMPTEVKKSRRHPLSKPPKRSPLSVLKQDPTSEKELSSPMPLESDM
KKQEHLWQNQSPNFLAEKAFNAAVAALQPYCAICSLFCPYAKPQKDVFVSPDAHRASLPK
HGSRTRPLVPEMCFSVGARNTEPPPTNYHIAEDGTSVLLRCSSCHMQVHSSCYGVRPESI
TEPWMCSRCVAGAWTVECCLCNLRGGALKTTTDKRWVHVICAIAVAEARFVNAIEREPVD
VSAVPESRKNLKCVFCHSKNANQNRGACIQCSSEKCATSFHVTCAQIAGVVMTPADWPYV
VTVTCHKHKRVPPKPRKAAKAPPGLNLDQRVIGRNNDSWYYHCTIVGMAAQTFYEVNFDD
GSYCDNVHPENILSHDCLHSGPPDVGELIMVSMPEGQLLNASFVRQHTLQYYQVEFQDKS
QLLLKPSEIHQLDQELPKRVRARLAINAPQQEVSSADEAQAAKRRCLPSGSAPPTQAPTE
TTSNPDCPLTSAPVAASAAQHHSISTPPTSQPLSQPTTTPQDVPASINSIQMDTVSQMDT
SAALTNTPAESAPASDPVLTPQSTPFQSTLNSDPLLSVPSPPPPPQHMSDGYMPSSGYVS
YMETLLNSHFPQDGGPGPLY
NT seq 3843 nt   +upstreamnt  +downstreamnt
atgctagaagaaaatcgatcaagggaatttttacaaagcgaaaccaaatcgattgaacga
aacagagcgaggcactactttgctgcaggaggtttacctgcaaccttcaaagacccaatg
gctacagatatgcccatggacacggtgccagctcctcaccctgtcccagcctcacacccc
gaaaatgccccagactctcctcctgacctcagccccagtgcagcccaagaccagattcct
acccaggagccagcaatagctgaaacgcctgaaacagcggggtcctcagaacacgattct
gctccagatctcatcccagctcagtccatagaccaagatgtggccccaggccttgttcct
ggtcctgacctgcccccgccccctctggtgccaccagttctgcctgtcccaccagccagc
accaagaaccccagctgcaagattatgaccttccgcccgaccatggaggagttcaaagac
tttgctaaatacattgtctacatggagagtcaaggagctcaccgtgctggtctggcaaag
gtgattcctccagagggctggaagccgcggaggtcctatgacaccatcgaggatatggtg
attccagctcccatcatgcaggtggtgactggacagtcaggtctgttcactcagtacaac
atccagaagaaatctatgactgtgagcgagtaccgcaaactggccaacagtaagaggtac
tgcacaccccggcacaaagattttgatgacctagagaggaagtactggaagaacctcact
tttgtgtcacccatttatggcgctgatgtcagtggctccatctatgatgaggacattcac
gagtggaacattggccacctcaacacactgctggatatggtggagcaggagtgtggcatc
gtcattgagggtgtcaacactccttacctctattttggcatgtggaagaccacgtttgcc
tggcacactgaggacatggatctctacagcatcaactacctgcactttggacagtccaag
tcctggtatgcgatcccacctgagcatggaaagaggctggagaggctggcacaaggcttc
ttccctggaagctcccagggctgtgatgcttttcttcgccacaagatgacactgatatct
ccatccatcctgaagatgtatggcattccttttgacaggatcactcagaatgaaggggaa
tttatgatcacctttccttatggctaccatgctggcttcaatcatggcttcaactgcgca
gagtccacaaactttgccaccttgcgctgggtggactacggcaagatggctacccagtgt
acctgccgtaaggacatggtgaagatctccatggatgtgtttgtgcgctgcctgcagcca
gatcgctacgagctgtggaagcagggcaaggacaccgcggtgttggaccaccttaaggcc
actgagcttagcagccccgaactggagcgctggaggcagcatcgtgtaacccatcgggca
aacctactgcgaagagccatgcagaagatgaagcagcttcgtcgtctaaagctggaggag
gtgaaagtgctggcagaggagggcattgagctgaatgctgctgattaccagcgtcaggtt
gaggagcgtgaggcccagcggagacaagagagggaggaacgtctagccaaagaggccatg
atgaccctggaggccatggagcgtgaggagcaggaggctgctgaggccgctgccaaggca
gcagaggctccagctgtagaggaacctgaggccaaacctcagaacttgatggaggacatt
gagaaaaagaagcccaaaaagccgaagaagactacaaatacccacaactccatcactggg
tttgaggaagcatttgagcagtttgctacatccaatatgaagacttcaaataatgttagt
tttgctgcagaggtggcgaaacctcctatcccaaaacagagtgacatcccagcagacaac
aagctggatgtgagtgccacccaggcatgcttctccaagatgaagatgccaacagaggtc
aagaagagtcgccgtcaccccctcagcaagccacccaaacgctcccctttgtccgtctta
aagcaagatccgaccagcgaaaaagagctgtcctcccccatgccgctggaaagcgacatg
aagaaacaggagcacctgtggcagaatcagtcacccaacttcctggcagagaaggccttc
aatgctgcagtggcagcactccaaccgtactgtgcgatctgttcgctcttctgtccttat
gcaaagccacagaaagacgtctttgtttcacccgacgcccatcgcgcctcccttcctaag
catggcagtcggactcgtccactggtcccagaaatgtgcttcagcgtcggtgcacgcaac
actgagcctccgcccaccaactatcacattgcagaggatggcaccagtgttctgctccgc
tgttcatcttgccacatgcaggttcactccagttgctatggtgtaaggccagagtccatc
accgaaccctggatgtgctcccggtgtgtggcaggagcctggacagtggaatgttgtctc
tgtaacttgcggggaggagctttgaagactaccacagacaaaaggtgggtccatgtcatc
tgtgccattgctgtggctgaagctcgcttcgtcaatgccatcgagagggagccagtggac
gtcagtgctgttccagaatcacgcaagaatctgaagtgtgtattctgccacagcaagaat
gctaatcagaaccgcggcgcctgcatccagtgctcgtctgagaaatgtgccacctctttc
cacgtcacctgtgcccaaatcgctggagtcgtcatgacgccagctgactggccgtatgtg
gtgaccgtcacttgccacaagcataaacgggtccctccaaagcctcggaaagcggccaaa
gctccaccgggtctgaacctggaccagagggtgattggtcgcaacaatgatagttggtac
taccactgtaccatcgtcggcatggcagcgcagacattctacgaggtcaactttgacgac
gggtcgtattgtgacaacgtgcacccagaaaacatattaagtcatgactgtctacatagc
ggccctcctgacgtgggagagttgatcatggtcagcatgcctgaaggtcaactcctcaat
gcttcctttgtcagacagcacaccctgcagtactaccaggttgagtttcaggacaagagt
caattgctgctaaaaccctcagagatccatcaactggatcaggaactgcccaagagggtc
cgagccagactggccattaatgcaccacaacaagaggtttcctcagcagatgaagcccaa
gcagccaaacgccgctgcctgccctcaggttcagccccgcctacccaagcccccacggag
acaaccagtaaccccgactgtcctctaacttcagccccggtagcagcatcagcagcacaa
catcacagtattagtacaccgccgacctcacaacctctgtcccagcccaccacgacccca
caggatgtccccgcctcaatcaacagcattcagatggacaccgtgtcccaaatggacacc
agtgctgccctcaccaacacaccggcagagtcggccccagcctcggacccggtgctgact
ccgcagtcaaccccctttcagtcaacattgaactctgaccccctcctgtccgttccatcc
cctcccccgccaccccagcacatgtctgacggctacatgccgagcagtggctacgtctcc
tacatggagaccctcctcaattcacatttccctcaggacggtggccccggtcccctgtat
taa

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