Acanthopagrus latus (yellowfin seabream): 119028176
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Entry
119028176 CDS
T08233
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119028176 (si:dkey-183n20.15)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119028176 (si:dkey-183n20.15)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119028176 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_2
TRAF3_RING
DUF1232
Motif
Other DBs
NCBI-GeneID:
119028176
NCBI-ProteinID:
XP_036969702
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All DBs
Position
11:complement(8960488..8967603)
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AA seq
259 aa
AA seq
DB search
MFNIPGVFILVASRFRLDRPKGHAHLRSPRSQVCTPEQTASTYMSCHKESTQSCASTSRD
WHCPVCLQTASFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCREKVSVLCNLFNESH
SDRQSKEVLGEITDYNKRYSGAPRRVTDYLCDTPLLLQLLVRGLGTMGVLVWLFFFRVAL
CCVGTVMSISSPPLETISSAVSPLETDPSLCGLLGVLDDLVVVILLLICVININQQMAPE
RGGRSVEATTSQGVMGSSL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatattccaggcgtgttcatccttgttgcgtcacgtttcagactggatcgcccg
aagggtcacgctcacctcaggtcacccagatctcaggtgtgcacacctgagcagacggca
tcgacgtatatgagctgccacaaggaatccacacagtcatgcgcctccacaagccgagac
tggcactgtcctgtgtgcctgcagacagccagcttccccgtccagaccaactgtggtcat
ttgttctgtgctccctgtctgatcgcctactggagacacgggtcctggctggatgcaatc
agctgtcctctctgcagagagaaggtcagcgtgctgtgtaatctgtttaatgagagtcat
tcggatcgtcagtcgaaggaggttctcggggaaatcacagactacaataagcgttattcc
ggagccccacgaagggtaacagactacctgtgtgacacacctctcctcctgcagttactg
gtgcgaggcctgggcaccatgggagtactcgtgtggctgtttttcttcagggtggcgctt
tgctgcgtggggaccgtgatgtccatctcctcgcctcctctggagaccatttcctcagct
gtaagccccctggaaacagacccctccctctgtggactgctgggggtcttggatgacctg
gtggtggtcatcctgctcctcatctgcgttatcaacatcaaccagcaaatggcgccagag
agaggaggacgctctgtagaagcgacaacctcacaaggagtaatggggagttcactgtag
DBGET
integrated database retrieval system
