Acanthopagrus latus (yellowfin seabream): 119028222
Help
Entry
119028222 CDS
T08233
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alat03036
]
119028222 (chd1l)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119028222 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
AAA_22
SWI2_SNF2
BRCT_2
NOA36
Med8
Motif
Other DBs
NCBI-GeneID:
119028222
NCBI-ProteinID:
XP_036969821
EnsemblRapid:
ENSALTG00010012821
LinkDB
All DBs
Position
11:6259988..6272072
Genome browser
AA seq
1027 aa
AA seq
DB search
MSDILLRIKNSVAEKKKTSVSQSDVKKWGLRGIQLRPYQLDGVQWLTQCLKNQQGCILGD
EMGLGKTCQTISLLVYMSGALGKKGPFLVLSPLSVMENWRKELEGFAPSLTVLCYKGDKE
RRAELQRETDTQDFHVLLTTYELCLKDVSFLRRWKWKVLVVDEAHRLKNQNSLLHKTLTQ
FSVGFRVLLTGTPIQNNLQELFSLLSFIQPSIFTPDDVDSFLNTYSNVQNQPTLAAELQS
VLEPFLLRRVKSEVAVDLPKKTELVMYHGMSALQKKYYKAVLMKDLEAFGNEQKTRLLNI
LMNLRKCVDHPYLFDGVEPEPFEMGEHLIEASGKLCLLDSMLTYLHKGGHRVLLFSQMTR
MLDILQDYMEYRGYGYERLDGSVRGEERNLAVKNFSSKDVFVFLLSTKAGGVGLNLTAAD
TVIFMDSDFNPQNDLQAAARCHRIGQNRPVKVVRLLARDTVEEIMYSRAVSKLHLTNTVI
EEGRFSLLDQAQSAAAGLQLSEILKFGVDKLLSSEESSVQDVKLEQILGPSRDGQWVADE
DFTSLKKEVEEEESISDSDGQNHMYYFEGKDYSKDPSTEDQKSFDRLLEEQLDEFQKTAG
EGRALRHKAGVSVSAALQIPTRKRKHLTEAELELRRQKRKEAAAKRAKMQEDLKKKQQEQ
KYKKKMAWWESCGYRSRSLPSLDSEEEEEEEEEEEEEEEEEEEEDDSSVCSTDSDSMAIH
YVLGDVTHPHTAQGDAIIVHCVDDSGRWGRGGLFTALEVRSDEPRKQYELAGKMKDLDLG
NVLLFPIDDKQSRLDGQDQLALIVAQQRDRANNLSGIFLTALDDGLKKIYTAAKKNKASV
HLPRIGHSTKGFNWYGTERLIRKHLASRGIPTFIYYHSRTAKKTALAQTSTSATSTSSPQ
PQVHNSDRSSDDTEAETPGPSAPPHSTDPAELPSFMRGVRVFFYNLPASERKRLARYLIT
YDGEEEEIMNPEVTHIVAEVENSIHTQELQDLVDRFTQAVPVRTDWLESCFSKQQKVNTA
VFSHDLR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacattttactgagaataaaaaacagcgtggcggagaagaagaagacgtctgtg
agtcagagtgacgtaaagaagtggggtttgagagggatacagctgagaccttaccagctg
gatggtgtgcagtggttaactcagtgcctgaagaaccagcagggatgcatcctgggagat
gagatgggtttgggaaaaacctgccagacgatctctctgctcgtgtacatgtcaggagct
ctcgggaagaaaggcccgtttttggtgctgagcccgctctctgtcatggagaactggaga
aaggagctggaaggctttgccccctctctgactgtgctgtgttacaagggagacaaagag
agacgggctgagcttcagagggaaacggacacccaggattttcatgttctgctcactaca
tatgagctgtgtctcaaagatgtttcattcttgagacggtggaagtggaaggtgcttgtg
gtggatgaagctcaccgactaaagaatcagaattcactattgcacaaaaccttgacacag
ttctcagttggcttcagagtcctgctgacaggaacccccatccagaacaacctgcaggag
ctcttctcgctgctgagcttcattcagcccagcatcttcacacctgatgacgtggacagc
ttcctcaacacttactccaacgtgcagaatcaaccaactctcgctgctgagctgcagagc
gtcctggagcccttcctgctgcgtcgagtcaagtcagaagtggccgtagatctgccgaag
aagacagagctggtgatgtaccacggcatgtcggctctgcagaagaaatactacaaagct
gttctgatgaaggatctggaggcttttggaaatgagcagaagacgcggctgctgaacatc
ttgatgaacctcagaaagtgtgttgaccacccgtacctgtttgatggggtggaaccggag
ccttttgagatgggggagcatctcattgaagccagtgggaaactgtgccttttggacagc
atgctgacttaccttcacaaagggggtcatcgagtcctgctgttctcgcagatgacgagg
atgctggacatacttcaggattacatggagtatagaggttatggctatgaacgtctggat
gggtccgtccgaggagaggaacggaatctagcggtgaagaacttcagcagcaaagacgtc
tttgtgtttcttctcagcactaaagcagggggagtgggcttgaacctcacagctgctgac
actgtcattttcatggacagtgacttcaaccctcaaaatgacctgcaagctgctgcacgc
tgccaccggattggtcagaacaggcctgtgaaagtagtccgccttctggctagagacact
gtggaggagataatgtactcccgtgctgtttccaagttgcacctcaccaacactgttatt
gaggagggacgcttctctttgctggaccaggctcagtcagctgctgcaggactgcagctg
agtgagatcttaaagtttggggtggataagcttctgtcatcagaggagagctctgtacag
gacgtgaaactggagcagatcctcggtccatcacgtgacggtcagtgggtggctgatgaa
gacttcacctcactcaaaaaggaagtggaggaggaagaaagcatctctgattcggatgga
caaaaccacatgtactacttcgaggggaaagattacagtaaggatcccagcactgaagac
cagaagagtttcgaccgattgctggaggaacagctggatgagttccagaaaactgcagga
gagggacgagctctacgacacaaagctggagtttcagtgtcagcagcccttcagattcca
accaggaagaggaaacatcttactgaggctgagctggaactgaggcgccagaagaggaag
gaggctgcagccaagagagccaagatgcaggaggacctgaagaagaagcaacaagagcag
aaatacaagaaaaaaatggcgtggtgggagtcatgcgggtacagatctcggagcctgcct
tctcttgacagtgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaggaggaggatgacagcagtgtgtgttccacagactctgacagtatggccatccac
tatgttctgggtgatgttactcatcctcacaccgctcagggagatgctatcattgtccac
tgtgttgatgactcaggccggtggggcaggggaggcttgtttacagctctggaggtgaga
tctgatgaaccacgaaagcagtatgagctggccggcaagatgaaagatttggaccttgga
aatgtgctactcttccccatagatgacaaacagtcaagattagacggtcaggatcaattg
gccctgatagtggcacagcaacgagacagagccaacaacctgtcaggaatctttctgaca
gctctggatgacggtctgaagaagatttacactgcagccaaaaaaaacaaggcaagtgta
caccttccacgcatcggacactccaccaaaggcttcaactggtacggcacagagaggctc
atcaggaaacacctggcttccagaggcatccccacattcatatactatcacagcagaaca
gcgaagaaaactgctctagctcagacatccacctctgcgacatcaacatcctcccctcaa
ccacaggtgcataactccgacaggtcgagtgatgacacagaagcagaaacccccggcccc
tcagctcctccccacagcaccgaccctgcagagctcccaagtttcatgagaggagtccgc
gtgtttttctacaacctgcctgcatcagagaggaagaggctggcccgctaccttatcact
tatgatggagaagaggaggagatcatgaatccggaggtcacccacatagttgcagaggtg
gagaacagcatccacacacaggagctccaggatctggtggaccggttcactcaggctgtc
cctgtccggacagactggcttgagtcctgcttctccaaacagcaaaaagtcaacactgca
gtgttctcacatgatctcagataa
DBGET
integrated database retrieval system
