Acanthopagrus latus (yellowfin seabream): 119028306
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Entry
119028306 CDS
T08233
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04020
Calcium signaling pathway
alat04144
Endocytosis
alat04510
Focal adhesion
alat04540
Gap junction
alat04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119028306 (pdgfra)
04020 Calcium signaling pathway
119028306 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119028306 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119028306 (pdgfra)
04540 Gap junction
119028306 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119028306 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
alat01001
]
119028306 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
alat04090
]
119028306 (pdgfra)
Enzymes [BR:
alat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119028306 (pdgfra)
Protein kinases [BR:
alat01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119028306 (pdgfra)
CD molecules [BR:
alat04090
]
Proteins
119028306 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Receptor_2B4
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
119028306
NCBI-ProteinID:
XP_036970034
LinkDB
All DBs
Position
11:7374259..7391480
Genome browser
AA seq
1473 aa
AA seq
DB search
MDGVKAYMMFGGILAALVSVTSGLSPPTIVSNEEEFILQPNSVFNISCTGKRNVIWAEPL
PKNTFVYPGYYTATLFIYNATVENTGYYMCAYEKPQGEPEDDPEEEENEAGIYVFVPDAQ
APFVPEMPKNLVIPMEPTGVPIPCRVSDPYTHAILRSVVTGEEMPAYYDNKMGFFGSLSP
GKYLCETNVNGQTFRSAVYTVETELAEEMEDFDIEVKASEETVRAGQPFNVTCVAPPGPG
FQQQWLHPKKQAVDAVQRKQILPDRVIYTLSIPQATAQDSGTYECSITHSLSGKVRASSV
AVTVFEENSFVALDHSGILPMEFVSLLEETEYTILINAYPAPKVMWLKDGKALQGNYYVL
AKTSHLKGNRYQSILTLRQPLVKDNGNYTITVLSGSRTAQFSFYLKVKAPTAAMFPPSSA
PVLVPQEEEIVVPLHTPFTLTCRGEAKLVWETPLDVPEIAQEDNSGLFVTTITVDNATAM
HTGFYNCYYSSNSTEDTEDSSIYVYVPDPDVPFVPSPVPFGNHVLSDHEEMEIQCRVSDP
SANVTLVNVDTQQPVPSVYDSKRGALGVFTAGTYVCKALINGEEHYSGEYIVHGWAGGAG
LHVELTAKRTALLVGDTLTVTCLARGSEILEDHWKYPGKVANRAIKTVHENKRDQEILYT
LTIPQASTKDSGIYSCSITDIITNDSQTKQLAIRVFAGEFMSILPEFREYESAELDEVRE
FRAEISSFPSARVTWLKDGIPLSDVTAEISTSLRQLSETSYMSVLTLIRAKEEDSGNYTM
RVENGDQVRTVGLILEVKVPAVIVDLMDIHHGSATGQSVVCITRGQPTPVVEWFICKNIK
HCANDSSSWAPLPANSTEVTMDAHFDEDDNLESQVMFGHLENTLAVRCLARNEMAAVSRE
VKLVSNGPHPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYI
YVDPMQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA
RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENF
LSLNPEKNNKKELDIFGINPTDESSRSYVILSFESKGDYMDMKQADNTQYVPMLEMSNAS
KYSDIQGSNYDHPPSQKGSSEGEMEELLSDDMNAGLSTTDLLSFTYQVAKGMEFLASKNC
VHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTT
LSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPHDVYEMMMKCWN
SEPEKRPSFLGLSDTVASLLPSSYRRHYERVNHEFLKSDHPAVTRVCVENDDAYIGISYK
NQGKLKDRESGFDEQRLSSDSGYIIPLPDLDPISDDEYGKRNRHSSQTSEESAIETGSSS
STFAKREGETLEDITLLDEMCLDCSDLVEDSFL
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtgaaggcgtatatgatgtttgggggtatcctggcggcgctggtgtcagtt
acctccggactgtcgccaccaaccatcgtgtccaatgaggaggagttcatcctgcagccc
aactccgtcttcaacatcagctgcaccgggaaaagaaacgtgatctgggccgaacccctg
ccgaagaacaccttcgtgtaccccgggtactacacggccacactcttcatctacaacgcg
acagtggagaataccgggtactacatgtgtgcgtatgaaaagccccagggtgagccggaa
gacgacccggaagaggaggaaaatgaggcgggaatctacgtgtttgtcccagatgcccag
gctccatttgtccccgagatgcccaagaacttggtcatccccatggagcccactggagtc
cccatcccctgccgcgtgtcggatccctacactcacgccatcctgaggagtgtcgtcact
ggagaggagatgcctgcctactacgacaacaagatgggcttctttggaagcctctcgccc
ggaaagtacctgtgtgaaaccaacgtgaacggccagacgttcagaagcgccgtttacact
gtggagactgagcttgcagaggagatggaggactttgacatcgaagttaaagccagcgag
gagacggtgagagcagggcagccatttaacgtcacctgtgtcgctccacccggcccgggc
tttcagcagcagtggcttcaccctaaaaaacaggctgtggatgcagttcagaggaagcag
attcttcctgaccgggtcatctacaccctcagtatcccacaagcgactgctcaggacagc
ggcacctacgagtgctccatcacccactcactcagcggcaaggtcagagccagcagcgtt
gctgtgaccgtcttcgaagagaattccttcgtggcactggaccacagcgggattctgcct
atggagtttgtcagccttttagaggagacagagtataccatcctcattaatgcttaccca
gcccccaaagtgatgtggctgaaagacggcaaagccttacaggggaactactacgtcctc
gccaagactagccacctcaaagggaatcggtatcaaagcattctgacattacggcagcct
ctggtgaaagacaatggaaattacaccatcactgtcctcagcggctctcgcactgctcaa
ttctccttttacctcaaagtgaaagccccaactgcagcaatgttcccaccgtcctcagct
ccagtgttagtgccacaggaagaggaaatagtggtgcccctccacactcctttcaccttg
acctgtcgaggagaggcaaaactagtctgggagacaccactcgatgttcctgagatagca
caggaggacaacagcggcctgtttgtcaccaccatcactgtggacaacgccactgcaatg
cacactggcttctacaactgctactacagtagtaacagcactgaagatacagaggacagc
agcatctacgtctatgtgccagatcccgatgttccgtttgtgccatcgccggttcctttt
ggcaaccatgtcctgtccgaccacgaggagatggagatccaatgtcgggtgtccgatccc
agtgctaacgtgacgctggtcaacgttgacacccagcagcctgtgcctagtgtttatgac
agcaagaggggcgctttaggagtgttcacagctggaacctacgtctgtaaagccctcata
aacggagaggaacactatagcggagaatacatcgtccacggctgggcagggggcgctggg
ctgcatgttgagctgacagccaaacggactgctctgctggtgggagacacccttactgtc
acctgtctggctcgaggatctgaaatactggaagaccactggaaatacccgggcaaagtg
gctaatcgtgctatcaaaactgtgcatgagaacaagagggatcaggagatcctttacacg
ctgacgatcccacaggcctcaacgaaggacagtggcatctactcctgctccattacagat
attatcaccaatgacagccaaacaaagcagctagctattcgtgtttttgcgggtgagttt
atgtccatcttgccggagttcagagaatatgaatcagcagagctggatgaggttcgagag
ttcagggccgagatcagctccttccccagcgcacgtgtcacttggcttaaagacggcatc
ccactcagcgatgtgacagcagagatctccaccagcctccggcagctcagcgagaccagc
tacatgagtgttcttaccctgatccgtgccaaggaggaggacagcgggaactacaccatg
cgagtggagaatggagaccaagttcgcactgtcggattgatcctggaggtcaaagtgcct
gcagtcattgtggacctgatggacatccaccatggctcagccacaggccagtctgtggtg
tgcattactagagggcagcccactcctgtggtggagtggttcatctgcaagaacatcaaa
cattgtgccaatgactcgtcttcctgggcacccctccccgccaactccacagaggtcaca
atggacgcacactttgacgaagacgataacctggagagccaggtcatgtttggtcatctg
gaaaacacgctggcggtgcgctgcctggccaggaatgaaatggcagctgtcagcagggag
gtgaaactggtgtccaatgggcctcacccagagctgactgtagctgctgctgtgctggtg
ctcctggtcatagtcatcatctcactcattgtgttggttgttatctggaaacagaaacca
cggtatgagatccgttggagggtcatcgagtctgtgagtccagacggtcatgagtacatc
tacgtggatcccatgcagcttccatatgactccagatgggagttccctcgtgacagacta
gtgctcggtcgtattctgggctctggagcctttgggaaggtggtggagggaactgcatat
ggactcagccgctcccaacctgtaatgaaggtggcagtgaagatgctgaaacccacggca
cgctccagtgagaagcaggccctgatgtctgaactaaagatcatgactcatcttggacca
catctcaacatcgttaacctcttgggagcatgcaccaagtcagggccgatctacattatc
acagagtactgcttctatggggacctggtcaactacctgcacaagaacagggagaacttc
ctcagcctgaacccagagaaaaataataaaaaagagctggacatctttggcatcaaccct
acagatgagagcagcaggagttatgtgatcctgtcgttcgagagcaaaggggactacatg
gatatgaagcaggctgacaacactcagtatgtgcccatgctggagatgagcaatgcctcc
aagtactcagacatccaggggtccaactacgaccacccgccctctcagaaaggatcaagt
gagggcgagatggaggagctgctgtcagacgacatgaacgcgggcctcagcaccaccgat
ctgctcagctttacctaccaggtggccaaaggcatggagttcctggcttccaaaaattgt
gttcatcgggacctcgcagccagaaacgtcctcctatctcaaggcaagatagtgaagatc
tgcgactttggactggcccgagacatcatgcacgacaacaactacgtctccaaagggagt
actttcctgccggtgaagtggatggcaccagagagtatttttgacaacctgtacaccact
ctcagtgatgtttggtcctacggcatcctgctctgggagatattctccttaggtggcacc
ccgtaccccgggatggtcgtggattcaagcttctacaacaagatcaagagcggatacagg
atgtccaaaccagagcacgcacctcatgatgtgtacgagatgatgatgaagtgctggaac
agtgagccggagaagaggccttctttcctcggtctgagtgacactgttgcttccttgctg
ccctccagctacaggaggcattatgagcgggtcaaccacgagttcctgaagagcgaccac
cccgctgtgactcgggtgtgtgtggagaacgatgatgcctacatcggcatctcctacaag
aaccagggaaaactcaaggaccgggaaagtggcttcgacgagcagcggctaagctcagac
agcggctacatcattcccctccccgacctggaccccatatctgacgatgaatatggaaag
agaaacagacacagttctcagacgtccgaggagagcgccattgagacaggctccagcagc
tccacctttgccaagcgtgagggtgagactctggaggacatcacgctgctggatgagatg
tgtttggactgtagtgacctggtggaggacagcttcctgtga
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