Acanthopagrus latus (yellowfin seabream): 119028323
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Entry
119028323 CDS
T08233
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119028323 (lingo3a)
Membrane trafficking [BR:
alat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119028323 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRR_LRWD1
LRR_9
LRRNT
LRR_6
V-set
Cupin_1
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
119028323
NCBI-ProteinID:
XP_036970060
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All DBs
Position
11:complement(10962934..11027807)
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AA seq
610 aa
AA seq
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MGVSLGQDVSWLLPFLFLLLMITVSPAQGQACPQRCECITKLKTVSCYGKRLSTLPDGIP
ADTKILDLSGNKLRWVEHGDLLPYQRLEKLDLSENMISVLEPNAFSSLQNLQSLSLRGNQ
LKLVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISALEDQNFRKLGNLRGLEIAHWP
FLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHLVSTNLAVVQPYALGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDGNP
LACDCRLLWILQRRKTLNFDGASPVCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQISAREGQVVSFICRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgagcctgggccaggatgtcagctggctgctgccgttcctgtttttgctgctg
atgatcaccgtatcacctgcccagggtcaggcatgtccccagcgttgtgagtgcattaca
aaactgaagactgtgtcctgttatggcaaacgtctgtccacgctgccagacggcatccca
gcagacaccaagatcctcgacctgagtgggaataagcttcgctgggtggaacatggcgac
ctgcttccatatcaacgtcttgaaaagctggacctgagtgagaacatgatcagcgtcctg
gaaccgaacgctttttctagtctccagaacctgcagtcgctttcgctgaggggtaaccaa
ttgaaactggtccccatgggggctttctcacgtctctccaacctgacttcgttggacctc
agtgggaataagattgtgattcttttggactttactttccaagacctgaaaagtctgaaa
aacctagaagttggagacaatgatttggtttatatttccaacaaggcctttctgggtctc
gtgggtctgagggagctgaccatcgagaggtgcaatctgacctctgtgtccagccagtct
ttgtcttacctgcataacctggtgactctgcggctccgctacctcagtatctctgccttg
gaggaccagaatttccgtaagcttggaaacctgagagggctcgagattgctcactggccc
ttcttagagtacatttcccctcacagcctgcagggtctgaacttatcttggttgtctatc
acacacaccaacatcacctccgtgcccacctctgccctccgcagcctggctcacctcacc
agcctcaacctctcctacaaccctatctctgtgttggagtcctgggcgctgcgggacctt
gttaggctgaaggagctgcaccttgtcagcacaaatctggcagtagtgcagccatatgcg
ctgggtggtctgaggcaaattcgccttcttaacctctccacaaacagcctggtgaccctg
gaagagggggccttccagtctgtcaacactctggagacgctgcgtttggatgggaaccct
ctggcctgtgactgccgtctgctatggatccttcagcgcaggaagacccttaattttgac
ggcgcttccccggtgtgcatgacgcccgtcgaggttcaaggacgggccctgaatgctttc
tctgactcggccctctttgatcactttacttgccagaagcccaaaatccgcaacaggaaa
ctgcagcagatatccgcccgcgaggggcaggttgtgtcattcatatgcagagcagagggc
gagccgacaccggtgatattctggatctctcctcaacgccgccgcatcactacgaagagc
agcggccgcctgactgtgttaccagagggcacgttagaaatacgctatgcccaggtaaca
gatagtggaacctacatctgcatagcgagcaatgccggtgggaatgacacctatttcgcc
acacttacagtgagcgggctgccactggatgcagccctcatggccaaccgcacttactat
gccggggaccttaatgacacgaatctgaatgacaccagagtcttcttgaagttcactctg
gacctcaagaccatcctcatatccacagcgatgggctgtatcatgttcctgggggtggtc
ctcttctgtttcatcctgctgttcgtgtggagtcgagggagagggcagcacaagaacaat
ttctcagtggagtattccttcagaaaggtggatggacctgctgccagtggaggacagggc
ggggcacgcaagttcaacatgaaaatgatttga
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