Acanthopagrus latus (yellowfin seabream): 119028464
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Entry
119028464 CDS
T08233
Symbol
pcdh18a
Name
(RefSeq) protocadherin-18a isoform X1
KO
K16499
protocadherin delta 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119028464 (pcdh18a)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119028464 (pcdh18a)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
PAG
Cadherin_C_2
YidB
Ly49
Motif
Other DBs
NCBI-GeneID:
119028464
NCBI-ProteinID:
XP_036970386
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All DBs
Position
1:complement(26284495..26292610)
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AA seq
1193 aa
AA seq
DB search
MPAGKIKGLFLTRMWKVVAVLALVTQHVSGKTLKYQIYEEQKVGTVIARLKDDVADILAK
LPSSVSLRFRAMQRGSSSFLSVREQDGEISIRTKIDREKLCEKNLNCSIQFDVLTLPTEH
LQLFHVEVEVLDINDNAPQFARAVIPIEISESAAVGARIPLDSATDPDVGENSLYTYALE
PNNFFKIDIQSRTDGVKYAELVVLRELDREMRSSYELQYTASDRGVPPRTGTTLLKISVA
DSNDNSPVFEKSSYVINLPENSPVGTLLIDLNATDADDGTNAKIVYSFSSHVSPKIMETF
KINPDSGHLTLIRRVDYESVNSYDIDVQAQDMGPNSMPAHCKILIKVVDVNDNKPDISIN
LMSSQGNGDAAYISEASPLDTFVALVRVEDLDSALNGEVECKLHGQGYFKLQKTYENNYM
ILTNVSLDREKRSEFSLTVVAEDRGTPSLSTVKHFTVHVTDENDNPPRFEKGRYEIFKSE
NNAPGAYLTSIMATDPDLDNNGQVSYSILENSVHGSSISTYVTIDPSNGAIYALRTYDRE
DVSRISFVVQAKDAGKPSLLSNATVILNILDENDNPPVIVVPQLWNFTADVPASKFTEAG
HLVTVVRATDRDTGVNAELICSIVSGNDEGFFLIDPRTCEIHANASLENFPHEHAELTIV
VRDQGRESLSAKAVLKITLYENIENHVQVMDQGESSLDVSLIIIISLGAICALLLVIMVV
FAAHCNREKKDTRHSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSP
SATPPMERAQMGSRQNHHSRQSLNSLVTISSNHIPESFALELAHATPPVEQVSQLLSMLH
QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLG
EGFSDLIHLEMHHRLHPAMRLCTDECRVLGHSDQCWMPPLSSPASSADYRNNMYIPGEES
AQQPQIDDDQSSVDSERRKSFSTFGKEPGSEEGGAGGVVAGGGDGCAAGGGAGSLLTEMN
SVFQRLLPPNMDSYAECTETSPPSSSTTTERVSGRGGNAAGNHSNNAVPQDNRRGLLPGG
KGPAYPPGVAAWAANTHYLNPGSGSVGTNHVPASPSPASTSTATAANGQPPHLKWLPAME
EIPENYEEDDFEGVFHPGHPGGKRSSEGRHEAGMDTSELVHEINKLLQDVRQN
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaggaaaaataaagggactgtttctgacgagaatgtggaaagttgtggccgtt
ttggcgctggtcacacaacacgtctccggtaagacgctgaaatatcagatttacgaggag
cagaaggtcggcacggttattgcccgtttgaaagacgatgtcgcggatattctggccaaa
cttcccagctcggtgtcgctgcgcttcagggctatgcagcgggggagctcgtctttcctc
tcggtgcgcgagcaggacggagaaatcagcatcaggaccaaaattgaccgcgagaaactc
tgcgaaaagaacctcaactgctccatccagttcgacgtgctgacactccccaccgagcac
ctgcagctgtttcacgtcgaggtggaggtgttggacatcaacgataacgcaccacagttc
gcccgcgccgtcatccccatcgagatctccgagagcgcggccgtgggagcgcgcattccc
ctggacagcgccacggaccccgacgtcggggagaactcgctgtacacgtatgccttagag
cccaacaacttcttcaagatagacatccagtccaggactgacggggtgaaatacgcggag
ctggtggtgctcagggagctggatcgggagatgcgctccagttatgaacttcagtacacg
gcctctgacaggggcgttccccccagaacgggtacgaccctcctcaaaatcagcgttgca
gactcgaacgacaacagcccagtttttgagaagtcgtcatacgtcataaatctgccagaa
aactcacctgttggcactctgctcatcgacctaaacgccactgacgcagacgacggcacc
aacgccaaaatagtctactcattcagcagtcacgtgtcccccaaaatcatggagacgttc
aaaattaaccccgacagcggtcacctgacgctcatcagacgtgtggactatgagagtgtg
aactcttatgacattgatgtccaggctcaggacatgggaccgaactcgatgccagcacac
tgcaagatcctgatcaaagtggtcgacgtgaacgacaataaaccagacatcagcatcaac
ctcatgtcctcccaggggaacggggacgcagcctacatatcggaggcgtctcctctggac
acgttcgtggctctggtgagggtggaggacttggactctgcgctgaacggggaggtagag
tgtaaacttcacgggcagggatatttcaagctccagaagacctatgagaacaactacatg
atcctgaccaatgtgtctttggaccgcgagaagaggtcagagttcagtctgacggtggtg
gcggaggaccgggggacccccagtctctccacagtcaaacacttcactgtgcatgtcact
gatgaaaatgacaacccgccacgcttcgagaagggccgatatgagatcttcaaatcagag
aacaatgcccctggagcgtatctgacctccatcatggccactgacccggatctggacaac
aacgggcaggtgagctactccatcttggagaactctgttcacggaagctccatctccacc
tacgtcaccattgacccctccaatggcgccatctatgctctgcgcacctacgatcgtgag
gatgtgagtcgcatctcctttgttgtgcaagccaaagatgcggggaaaccatcgctgctc
agcaacgccaccgtcattctcaacatcctggatgagaatgacaaccccccagtcatcgtg
gtcccccagctgtggaacttcaccgctgacgtaccggcgtcgaagttcacagaggcggga
cacttggtgaccgtggtcagggcgactgatcgtgacacaggggtcaacgctgagctcatt
tgctccatcgtcagtggcaacgatgagggcttctttctcattgacccaagaacctgtgaa
atccacgccaacgccagcctggagaacttcccacatgagcacgctgagctgacaatcgtg
gtccgagatcaaggaagggagagcctgagcgctaaggcggtgctgaaaatcacgctctat
gagaacatagagaaccacgtccaggtgatggaccagggcgagtcttctctggacgtgtcc
ctgatcatcatcatctccctgggggccatctgcgccttgctccttgtcatcatggtggtg
ttcgccgcccactgcaaccgcgagaagaaggacacaagacactcctacaactgccgggtg
gccgaatcgactcaccagcaccaccccaaaaagccctcgcgccagatccacaaaggtgac
atcaccctcgtccccacggtgaacggcacgctgccaatcagggcccaccaccgctcacct
tcggccacgcccccgatggagcgtgcccagatggggagcaggcagaatcaccacagccgg
caatcactgaacagcctggtgaccatctcatccaatcacatcccagagagctttgcactg
gaactggcgcacgctactccaccggtggagcaagtctcacagcttctgtccatgctccat
cagggccagtaccagcccagacccagtttccgtggcaacaaatactcccgcagctacagg
tatgcgttacaagacatggacaagttcagcctgaaggacagtggccgtggggacagcgaa
gcgggggacagtgactgtgacatggggcgggaatcccccgtggacaggctgctgctgggg
gagggcttttctgacctgatacacctcgaaatgcaccatcgactccacccagctatgaga
ctgtgcacggatgagtgtcgcgtcttgggacactctgaccagtgctggatgcccccgctc
tcctcccccgcttcctccgccgactaccgcaacaacatgtacatccccggggaggagtcc
gctcagcagccccagatcgacgatgaccagtcctccgttgactcggaacgccgcaagagc
ttctccactttcggcaaggagcctgggagcgaagagggtggggccgggggagtcgtcgcc
ggaggaggtgacggttgtgcagctggaggaggggctggctccctcctcactgagatgaac
tctgtgttccagcggctcctccctcctaacatggactcgtacgcagagtgcactgaaaca
agcccaccctcgtcctcgacgaccactgagagagttagcgggcgtgggggcaacgctgct
ggtaaccatagtaacaatgccgtgcctcaggataacaggagagggttgttgccaggtggg
aaaggccccgcctaccccccaggtgtggctgcatgggcagccaacacccattacctgaac
cctggaagtggatccgtgggaaccaaccacgttcccgcctctccctccccagcctccacc
tccacagccaccgccgccaacggacagccaccacacctcaaatggctgccagccatggag
gaaatcccagagaattacgaggaagatgactttgaaggtgtcttccacccgggtcacccg
ggtggcaagcgcagcagcgagggccgccacgaggccggaatggacactagcgagctggtc
cacgagatcaacaagctgctgcaggacgtcaggcagaactag
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