Acanthopagrus latus (yellowfin seabream): 119028469
Help
Entry
119028469 CDS
T08233
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119028469 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119028469 (arhgef18b)
Membrane trafficking [BR:
alat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119028469 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
119028469
NCBI-ProteinID:
XP_036970389
LinkDB
All DBs
Position
11:14941419..14989325
Genome browser
AA seq
1463 aa
AA seq
DB search
METAKGVPGAEEVKDPCSMDLDGEPDFDSFPILVRSMSTSRRHSWGVPVSPINLGRRLSL
DTMAMDSDGEREDDEEGQKSLFESTEQPSNSCKADPGDEIDGLRLRMPRPRARVTSMASG
ATGRHLYSRSEILATDECSRAAHISRVVQTSKQAARAAGAEEFDPEENLHSTEGQSHMLM
VQKVLQELKLYHGAKQRNIRSETKVSGNVTWYEFLSNENEDEEDRTEKVEKGTKVKRTLS
SLRNRVTGSFNKDKGKSREREQQKEKGKEAKEKVSGGGNRHYLVPGSFSSCATCSLCSKT
LQKKHGLQCMNCAVNVHKSCKSLLGECTSSKNKRDSVLRTGSSGSPHFALKDRDRERDHL
GPASFQALDGHPGFLSTPGMTISPWGPSTQPTSAHTTSSTAAPASSLSYSLRDHNSSGSL
PGEMDETDALRSKRCNEDAISLAPSTTESIIVEDAHYAAVRADLESDAQDLEAESWSSAV
DQQHVKKLSKEMVKRQDVIYELMQTEMHHVRTLKIMLHVYVRELKENLQMDAGRLDCLFP
RLENLLELHTHFLSRLKERQRENLISPNDRNYAVNRVADILISQFSGEVGEKMKDCYGDF
CSHHTEAVSYYKEQLQNNKKFQNIIRKINNLSIVRRLGVTECILLVTQRITKYPVLVERI
LQNTEAGTEEHEDLTRSLGLIKDTIVQVDALVNLHEKNSRLRDIHNKMEPKALGKIKDGR
VFRREDLAQGRRRLLHEGTVNWKAASGRLKDILAVLLSDVLLLLQEKDQRYVFATVDNKP
SVISLQKLIVREVAHEEKAMFLICASSNEPEMYEIHTTSKEERNSWMTHIRQAVESCPHT
EERLFSEEEEARAFRFKEFQERLSQKDAVIAQALTEKLQLFADLAESVVGAEDAASRSRL
LLRGDASELQQGETLLKGAITEVENLQNLLQSGVREASPTSRLEEGSGSGVLPKRADTFG
GYDSSHSSPTILSKNGSVKKNFSGESRNRDRSQRASSDPQLKDLCDSHTLEQTVDESCCS
PPRWNRIWSNSFPEAEFFDRVLMLSQRLYSLQAIMTQWDSHIELQRASLPGRHRGNVLLE
QEKQRTIALQREELASFHKLQSQHRQEQQRWERERERHRQQVEATEARLRQREEECRRLE
EHLAEERRELESQRETYQQDLERLRESTRAVEKEKERLEHQKKIKRKTIEVAPLSGSLNG
ELLMSSGLATSTSISDLPLPQKPLARGSLSVAPADYPERPEVMLRREMSSSTLPLKTEVP
LHLFSTTNQLHKPVGVQQQIPTKLAAFSGKGKGGKMGKASHRTDSTASVDMKQMLPLKLS
ARDDTALKAKRSISPHQQLPLSASPLPPPLHLHADQLSPPDNAGLDTKSTSSIGTSHPPN
AQKPPMPPPQSHPQPPMQPPTIPPHSQSAGSLQFQAHLPPQGLGPNAQAHVQVNVHGLSH
SHSMPPPYKINTEDLNKEDVIFF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggcaaaaggagtaccaggcgcagaggaagtaaaggacccgtgcagtatggat
ttagacggagagccagactttgacagctttcctattctggtcagatccatgtcaacgtct
cgcaggcacagctggggtgtccctgtgtcccccattaacctggggaggagactaagtctg
gataccatggccatggacagtgatggagagagggaggatgatgaggagggacagaaaagt
ctctttgagtccaccgagcaaccatctaacagctgcaaagcagaccctggagacgagata
gatggtcttaggctgaggatgccacgtccaagagccagggtcaccagcatggccagtgga
gcgaccggcaggcatctctactcccgctcggagatcctcgccacggacgaatgttcacgt
gctgcacacatttctcgtgttgtacagacatccaaacaggctgcacgggcggcaggagcg
gaggagttcgaccctgaagaaaaccttcactctactgaaggacagagccatatgctgatg
gtacagaaagttctgcaggagctaaagctgtatcatggagcgaagcagaggaacatcaga
tcagagaccaaagtgtcaggaaatgtcacctggtacgagttcctctctaatgagaatgag
gatgaggaggatcgtacagagaaggtggagaaaggcaccaaggtgaagaggactctcagc
tccctgaggaacagggtgactggctccttcaataaagacaagggtaagagccgagaaaga
gagcagcagaaagagaaggggaaggaggccaaggagaaagtgtctggcggcggcaacagg
cattacctggtgcctggctctttctccagctgtgccacctgctcactgtgcagcaagacc
ctgcagaaaaagcatggcctgcagtgcatgaattgtgctgtgaacgttcacaagagctgc
aagtctctgctgggtgagtgcaccagcagcaagaataagagagattctgtactaaggact
ggctcatcaggatcccctcactttgcgctgaaggatcgggacagagagcgggatcatttg
ggcccagcctcatttcaggccctggatggccaccctggttttctcagcaccccaggcatg
accattagtccgtggggacctagcactcagccgacttccgcccataccaccagctctact
gcagcccctgcctccagccttagctacagtctccgtgaccacaacagctcaggatccctc
cccggggagatggatgagaccgatgccctccgctccaaacgctgcaacgaagatgccatt
tcactcgctccctccaccaccgagtccatcatcgttgaagatgctcactatgcagcagtg
cgagctgatctggagtctgacgctcaggacctggaggcagagtcgtggagttcagcagtt
gaccagcagcatgttaagaaactctctaaagaaatggtgaagagacaggatgtgatatat
gagctgatgcagaccgagatgcaccacgtgcgaacactgaagatcatgctgcatgtgtat
gtccgggagttgaaggagaacctccagatggacgcgggcagattggattgtctgttcccc
cgcttggaaaacctccttgagctccacacacatttcctgtctcgtctgaaagagcggcag
cgagaaaacctcatctcacccaacgacaggaactacgctgtcaacagagtggcagacatt
ctaatctcacagttttcaggtgaagtaggtgagaagatgaaggactgctatggagatttc
tgcagtcaccacactgaggctgtcagctactacaaagaacagctgcaaaacaacaaaaag
ttccaaaacatcatacggaaaattaacaacctgtccatcgtacggcggttaggagtgaca
gagtgtatcctgttagtgacgcagcgcatcaccaagtacccagtgctggtggagcgcatt
ctgcaaaacactgaagctggtacagaggagcatgaggacctgactcggtcactgggtctg
attaaagacaccattgttcaggtcgacgcgctagttaatctccacgagaagaactctcga
ctccgagacatacacaacaagatggagccaaaggcactggggaaaatcaaagatggccgt
gtgtttcgcagagaggacctggcacagggcaggagacggctgctgcatgagggcacagtc
aactggaaagctgcctctggcaggctcaaagatattcttgcagttctcttgtcagatgtt
ttgctcttgctacaagagaaggatcagagatatgtatttgccacagtggacaacaagccg
tcagtgatctctctgcagaagctgatcgtcagggaagtggcccatgaggagaaagccatg
tttcttatctgtgcctcctccaatgaaccagagatgtacgagatccacaccacctccaag
gaggagagaaacagttggatgacacacataagacaagctgttgagagttgtcctcacaca
gaagagaggctgttcagcgaagaggaagaggctcgagccttcaggttcaaagaatttcaa
gaacgtttgagccagaaggatgcagtgattgcacaggcattaactgagaagctgcagctg
tttgcagacctggcagagtctgtggtaggtgcagaggatgcagcttctcggtccagactg
ctgttacgaggagatgcctcagaactccagcagggggagaccctgctcaaaggagccatc
accgaggtggagaatcttcagaacctgctgcagtctggagtcagggaggcgtctccgacc
tcacggctggaggaagggagcggttctggggttctgccaaagcgagcggacacctttggg
ggctatgacagcagccacagcagccccaccatcctcagtaagaatggcagtgtgaagaag
aacttttctggcgagtccagaaacagagacagaagccagagagccagctctgaccctcag
ctcaaagacctctgcgacagtcacaccctagagcagacggttgatgagagctgctgttct
cctcccagatggaaccgcatctggtccaactccttccccgaggctgagttctttgacaga
gttctgatgctctcccaaaggctctacagtctgcaggccatcatgacacagtgggacagt
cacattgagctgcagcgggcctccctcccgggccgccacagagggaacgttctcctggag
caggagaaacagcggactatagccctgcagagagaggagctggccagcttccacaagctg
cagtctcagcaccggcaggagcagcagcgctgggagagggagagggagcggcaccgccag
caagtcgaggccaccgaggccagactccgacagagggaggaggagtgcagacgactggag
gagcatctggcagaagagaggagggagctggagagtcagagggagacataccagcaggac
ctggagagactgagagagtccaccagagctgtggagaaagaaaaggaacgcctggaacac
cagaagaagatcaagagaaagactattgaggtggctcctctgtccggcagtctgaacggg
gagctcctcatgtcgtctggcctcgccacctccaccagtatctccgacctgccgctgcct
cagaagcctctggcacgcggcagcctgtccgttgcaccagccgactatccggagcgtcct
gaagtgatgctgcggagggagatgagctcatccaccctgccgctgaagacagaggtgccc
cttcatcttttcagcaccaccaaccagctgcacaaaccagtgggggtgcagcagcagatc
cccactaagcttgccgccttcagtggcaaagggaaaggaggcaagatgggcaaagcctcc
catcgcactgacagcacggcctcagtggatatgaagcagatgctgccgctgaagctgtcc
gcccgagacgacaccgccctcaaggccaagcgctccatcagcccccaccagcagctcccg
ctgtcagcctctcctctgcctccccccttgcatctccacgcagatcaactcagtcctcca
gacaacgctggactggacaccaagtccacctcctccatcggcacctcccaccctccgaat
gctcagaaaccccccatgcctcctccacagtctcatcctcagccccccatgcagcctccc
accatccctccccactcgcagagtgccgggtccctccagttccaggcgcacctgccacca
caaggcctcggtccgaacgcccaggcccacgtccaggtaaacgttcacgggctcagccac
agccacagcatgccgccaccctacaagatcaacacagaggacctcaataaggaggacgtc
atcttcttctaa
DBGET
integrated database retrieval system
