Acanthopagrus latus (yellowfin seabream): 119028482
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Entry
119028482 CDS
T08233
Symbol
zgc:172302
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat02010
ABC transporters
alat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119028482 (zgc:172302)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119028482 (zgc:172302)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alat02000
]
119028482 (zgc:172302)
Transporters [BR:
alat02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119028482 (zgc:172302)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
119028482
NCBI-ProteinID:
XP_036970419
LinkDB
All DBs
Position
11:20069752..20097193
Genome browser
AA seq
2378 aa
AA seq
DB search
MAFFRQLFLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWVQGIICNINNPCFHSPTPGETAGQVGNFDNSILSRLFIDAQTVLSYSGNRS
FSGFQDLMESVRRLGERPGAWPNLPVEEYLRANETFSTFLLTNGSLSPTTVNQLLKARLN
FQVTLAGAQLQLKDLVCNASMLRQYLMVKDEATMNDLQTELCNLPADILQEAERLFLTQL
DFTKFFTRDRLIANAGDLRVISQAVTSVSQELAVLIDDFSSLSSFAEMSAALRLLSPENR
TALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGAEDTDLDQDINTTPF
CKSLIHGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQHIMKEVNKTFEDLKILQELNA
AWMEVGPWIKNYMESSVEIQMLQDLLRRPEVAVLVNLRLENTSWTASRIARFLSTPTPDT
PRKPGAPPTWLDVYNDLSHTITTLAEVTECFSLNKLEGLDTEGQMINRALELLEDRQFWA
GVVFLLPNSSSPDLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGFA
YVQDLVERAVSRVLTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSLVPFLVSAGLLIALLKWGDILPYSD
PSVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNTT
YRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWHNLHSSPVEGDSYSFTTSIVMLYVDAFI
YATLAWYIEAVFPGEYGIPRPWYFIFQVNYWGGVPLEAGMPIPAAPTEEDEDHIEPEPTD
LTLGVSIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTISVLTGLFPPTS
GTVYIKGMDIRHDMDLIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLTEAEVKAELDT
LLSDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLL
LKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTVVKREG
LDTSTPSSTSICTGTTSTSTSINKMPPLKDSESSMSEDTGLGSEETSSYVAALLALTQHH
IPGARLMEESGREAVLNLPQAAAKDSSLAVFLSDLDQRLPELGISSYGLSDSTLEEIFLR
VAEETGVDAEPEWQAESPNRQQPPAGQRVERQEEPETGRKRLRKQEPQETDLLSGGGQGW
VPMTDWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLIVPPFGKYPA
LQLQPWMYGDQFTFFSNDAPGNPAMENLLEALLDRPGFGTKCMEKEEEDNSMSPQCKAER
GGLFMRPQVEFSTWKMFSRGNWSKVRPSPDCQCSTEDVRRMLPDCPQGAGGMPPPQIKRL
TGDILQNLTGYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATETYSQVHHVQ
DSVMAIRTRYRVPQNSSLDHLLDRLPGFLGGLNSENNVKVWYNNKGWHAMVSFVNVMNNG
LLRSSLPPGSERRKYGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASF
ILFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFIGFQQQSYVSE
TNLPALILLLLLYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFV
DEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGKN
LFAMAAEGVIFFIFTILLQYKFFLRFRPWWVEPEKLPLGPEDEDVARERERVINGKVESD
ILTMTNLSKVYKADRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITYGEA
LLNHHSVLTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEKSVGKVAQWGVK
KLGLTQYAEREAGGYSGGNKRKLSTAISLIGTPPVIFLDEPTTGMDPKAKRFLWNCILSV
TKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLTDSQS
DPDSCSISAYMKKSFPSIELKERHQNVLQYQLPSHACCLARVFDVLANNHEELGIIDFSV
SQTTLDQVFVNFAKEQTDDDVLTEVVVGNRPTQTNQIALPVRINPPTIQPPPPVTPPEPS
KTPQQQGKSSDSKPKEGQSKKAKASKAKSKEGKSKGEKSSSTAMTRIPRPEEANQASSNG
EVQGESSKSSGSKHRAESSSKDPSALFIVDSNTQDSAL
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttcaggcagctattcctcctgctctggaagaacatcacataccgcaggagg
aataagatccagctgatcatcgagctcctctggccgctcttcctcttcgtcatcctcatt
tctgttcgtcattcacaccctccttacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagccggcaccttaccttgggttcagggcataatctgcaacatcaacaacccc
tgcttccacagcccaactccaggggagacagcgggccaagttggcaactttgacaactcc
atactgtctcgtcttttcatcgatgcccagactgttctgtcctacagtggaaaccggagc
ttctctggctttcaggacctaatggagagcgtccgaaggctgggagagagacctggagcc
tggccaaatctcccagtagaggaatacctgagagccaatgagacgttctccaccttcctc
ctgaccaatggcagcctgtcgcctaccactgtgaaccagctgctgaaggctcgtctcaat
tttcaggttactctagctggagctcagctgcagctgaaggacttggtgtgtaatgcaagc
atgttgagacaatatctgatggtgaaagacgaagccaccatgaatgatcttcagactgag
ctgtgtaacctgccagctgacattctgcaggaggctgagcgtctttttctcactcagctc
gacttcaccaagttcttcaccagagaccgtctgatagcgaacgctggggacctcagggtc
atcagtcaggccgtcacctctgtttcccaggagcttgctgtcctcattgatgatttctca
tctctctccagctttgcggagatgagtgcagctcttcgtctcctgtctccggagaatcgc
acagcgctgccaagggagagctttcgggctttttccaggatcatgtgcggtcaccctgag
gttggcggtgagcgcatcccatcactcaactggtatgaagacaatgacatcaagtcgttt
ttaggaaaaaatggtgctgaagacacagacctggatcaggacatcaacaccactccattc
tgtaaaagtttgatccacggtctggagtccaaccccctgtctcgcattgtgtggcgagga
atcaaaccactgttcattggaaaactgctgtacacacctgacactcctgcggtacaacac
atcatgaaagaggtgaacaagacatttgaagaccttaagatcctccaggagctgaatgca
gcgtggatggaggtcggaccttggatcaagaattacatggaaagcagtgtggagattcag
atgctgcaggatttgttgaggcggccagaggtagcagttctggtcaacctgcgactggag
aacacgtcctggacagcatcgaggatcgcacggttcctttccactcccactccagacacc
ccgaggaaacctggagctccacctacctggctggatgtctacaacgacctcagccacacc
atcaccaccctcgcagaagtcactgagtgtttctccttgaacaagctagaagggttggac
accgagggtcagatgatcaacagggctttggagctactggaggacagacagttttgggca
ggtgtggttttcctgctgcccaactcctcatcccctgatctgccaccccacgtcacctac
aaaatccgaatggacatcgatgatgtgacaaggaccaacaagatcaaggacaggttttgg
gatcctggtccagcagctgatccgtttaatgacatgcgctacatttggggtggcttcgcg
tacgtgcaggacctggtggagagagctgtgagccgcgtcctgaccggagttcagcagaca
accggcatctacatccagcagatgccctacccctgctatgtggatgatgttttccttcga
gtgctgaacagatctctgccactcttcatgacgcttgcctggatctactctgtggccatg
atcatcaaaggtgtggtgtacgagaaggaggcacggctgaaggaaaccatgaggattatg
ggtcttggaacagggacactgtggctcagctggttcatcagcagcctggttcctttcctg
gtctctgctggactccttatagctctgctcaagtggggcgacatccttccatacagtgac
ccgtctgtagtgtttttcttcctgactgcgtttgccacggccaccatcatgcaatgtttc
ctcatcagcaccttcttctctaaagccaacctggctgctgcatgtggaggacttatatac
tttggcctctatctgccttatgtactatgtgtggcctggagagaccgcctcaacaccacc
taccgagtcctcgcgagtttcctgtcacctgtggccttcggcttcggctgtgagtatttc
tctcagtatgaagagcaaggtgtgggcatccagtggcacaacctccactcaagccctgtg
gaaggagactcctacagcttcactacctctatagtcatgctttatgttgacgccttcatc
tatgccaccttggcctggtacatcgaagcagtgtttcctggtgaatatgggatcccgagg
ccctggtacttcatcttccaggtcaactactggggtggagtccctttggaggcaggcatg
ccgatccccgctgcaccaacagaggaggatgaagatcacattgaaccagaacccactgat
ctgacgctgggtgtgagcatcagaaacttggtgaaaatctacaagaagggagcgaaactg
gccgtcaatcacctcaacataaagttctacgagggccagatcacctcttttcttgggcac
aacggagctggcaaaaccaccaccatatctgtccttactggcctgttcccacccacctcg
ggcactgtgtacatcaaaggaatggacatccgccatgacatggacctcatccggagaacg
cttggagtttgtccacaacacaacgtcttgtttgacatactaacagtggaggagcatgta
tggttttatgggtgtctgaagggtttgactgaagcagaagtgaaagctgagctggatact
ctcctgagcgacgtcggcctgctgcacaaaagacatgaacaaactaaaaacctctctggt
ggcatgcagaggaagctatctgtggcgatagcgtttgttggaggctcgaaggtggttgtt
ctggatgaacctacagccggggttgatccttactcccgcagagggatctgggatctgctg
ctcaaataccgtaaagaccggacaatcatcctgtctacccactacatggatgaggcagag
ctgcttggtgaccggattgccatcatctcccagggaaagctgtgttgctgtggctcaccg
ctcttcctgaaatcccgcctcggatctggctactacctcactgtggtgaagagagaggga
ctggacaccagcactcccagcagtaccagtatctgcactggtactaccagtaccagcacc
agcatcaacaagatgcctcctctcaaggacagtgaatcatccatgagtgaagacactgga
ctgggaagtgaagagaccagctcatacgtggcagcattgcttgccctgacacagcaccac
atcccaggtgcgaggctgatggaggagtcagggcgtgaggcagtgctcaacctgccgcag
gctgctgcaaaggacagcagcttggccgtcttcctgtctgacctggatcagaggctgccc
gagctgggcattagcagctacggcctgtcagacagcacactggaggagatctttttgcga
gtggcagaggaaaccggcgtggatgctgaaccagagtggcaggccgaatctccaaacagg
cagcagccaccagctgggcagagggtggagagacaagaagaaccagaaacaggaaggaaa
aggcttcgtaaacaagagcctcaagagacagacctgctgagtggtgggggccagggttgg
gtccccatgactgactggtggctgacctggcagcagctgagggctcttttcatcaaacgc
tggctatatgcgcgacggagccgcaggggcttctttgctcagatcgtcctgcctgctgtg
ttcgtgcttgtcgctctgctcttcagcctcatcgtgcctccatttgggaaatatcctgcc
ctgcagctgcagccgtggatgtatggagaccagttcaccttctttagcaatgatgcacct
gggaatcccgccatggaaaaccttcttgaagctctgctggacaggccaggttttggtacc
aagtgcatggagaaagaggaagaagacaacagcatgagtcctcagtgtaaagctgagcga
ggaggcttgttcatgcggccacaagtcgaattctccacctggaaaatgttcagcagaggc
aactggagcaaagtcagaccctcacctgactgtcagtgcagcactgaggacgtccgccgg
atgctgcccgactgcccgcagggtgctggtggaatgccgcctccacagatcaagaggctg
actggagacatcctccaaaatctgacaggttataacatttccgattacctggtgaaaacc
tactctcagatcctcaagaaaagcctaaaaaccaagaagtgggtgaatgaattcagatat
ggaggcttctccctcgggggcagcgccaccgagacttattctcaggtccaccacgtccaa
gactcagtcatggcgatcaggactcgttatcgggttccacagaacagttcactggatcat
ctgctggacagactgccaggatttctaggaggactgaacagtgaaaacaatgttaaggtg
tggtacaataacaaaggatggcatgccatggtgtcatttgtcaacgtgatgaacaatggc
ctgctgagatcgagtctcccaccaggttcagagagaagaaaatatggcatcactgcctac
aaccacccgctcaacctcacaaaggaacaactcactgaaatggccatgatgaccacatca
gtggacgttctggtttccatctgtgtgatctttgccatgtcctttgttccggccagcttc
atcctttttctgattgaagagcgagtcagcaaagccaaacaccttcagtttgtcagcgga
gtcaaacccatcctctactggctggccaacttcacctgggacatgttgaactacactgtc
ccggccaccatggtggtgctgattttcatcggtttccagcagcaatcttacgtctcagag
accaacctgcctgctctcatcctgctgctgctgctctatgggtggtccatcactcctctg
atgtacccagcatcctttgtgttcagcgttcccagcacagcttatgtcgttctgacctcc
atcaacctcttcatcggcatcaacggcagcattgccacatttgtcctggagttgtttgtt
gacgagcatctgaacgaggtgaacaggatcctaaagaaggtgtttcttatcttccctcat
ttctgcctgggacgaggactcatcgacatggccaaaaaccaggccatggcagacgccttc
cagagactgggcacaaagcagactctggaccctcttcagtgggactttgtaggaaaaaac
ctgtttgcaatggcagctgaaggcgttatcttcttcatcttcaccatactgctgcagtac
aagttcttccttcgcttcaggccgtggtgggttgagcctgagaagcttcctcttggccca
gaggacgaggacgtcgccagagagagagagagggtcataaatggaaaagtcgaatcagac
atcctcaccatgaccaacctgagcaaggtttataaggcagacaggaagcctgcagtggat
cgtctgtgccttgggattcctcgtggtgagtgttttggcctgttgggggtgaatggagca
gggaagacctccacctttcgcatgttgactggggacacagcaatcacctatggagaagcc
ctccttaatcaccacagtgtgctgacggagatggagcgagtccaccagctgatgggttac
tgtccacagtttgacgccatcagcgacctgctgacaggtcgggaacatctggagctgtac
gcccgtctgcggggagtaccagagaagtctgtcggcaaggtggcgcagtggggggtgaag
aagctgggactgacccagtatgctgagcgggaggctggaggctacagcggaggcaacaag
agaaaactctccactgccatctccctcatcggcactccgcctgttatattcctggatgag
cccaccaccggtatggacccaaaagccaaaaggtttctgtggaactgcattctcagcgtc
accaaagagggaagagctgtagttctcacctcccacagtatggaggaatgtgaggctctc
tgcaccagaatggccatcatggtcaatggtagattccagtgcctcggatctgtacagcac
ctgaagaacaggtttggtgatggctacaccatcatcctccgcctgacagacagtcaatca
gacccggactcgtgctccatcagcgcctatatgaagaagtcatttcccagcatcgagctg
aaggagcgccaccagaacgtgctgcagtaccagctgccctcacatgcctgctgcctggct
cgtgtctttgatgtgctggccaacaaccacgaagagctcggcatcatcgacttctccgtt
tcacagaccaccctggaccaggtgtttgtcaactttgcaaaggaacagactgatgacgac
gtcctcacagaagttgtcgtcggtaacagaccaacacagaccaaccagattgcgctgccg
gtcaggattaaccctcccaccatccaaccaccaccgccagtcacaccccctgagccgagc
aagactccacagcagcaggggaaatcatctgacagcaaaccaaaagagggtcagtccaag
aaggcaaaagctagcaaggccaaatctaaagaaggcaaatccaaaggagaaaaaagcagc
agtacagcgatgaccagaatacctcggccagaggaggcgaatcaggcgagcagtaacggt
gaagttcagggagaatccagtaaatccagtgggtccaaacacagagcggagagctccagt
aaagatccttctgccctctttatagtcgacagcaacacacaagacagtgcactgtga
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integrated database retrieval system
