Acanthopagrus latus (yellowfin seabream): 119028494
Help
Entry
119028494 CDS
T08233
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04145
Phagosome
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119028494
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119028494
09144 Cellular community - eukaryotes
04510 Focal adhesion
119028494
09142 Cell motility
04820 Cytoskeleton in muscle cells
119028494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119028494
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119028494
00536 Glycosaminoglycan binding proteins [BR:
alat00536
]
119028494
Membrane trafficking [BR:
alat04131
]
Endocytosis
Phagocytosis
Opsonins
119028494
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119028494
Exosomal proteins of colorectal cancer cells
119028494
Exosomal proteins of bladder cancer cells
119028494
Glycosaminoglycan binding proteins [BR:
alat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119028494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
Motif
Other DBs
NCBI-GeneID:
119028494
NCBI-ProteinID:
XP_036970484
LinkDB
All DBs
Position
11:complement(19961463..19974258)
Genome browser
AA seq
747 aa
AA seq
DB search
MLWFLVLSCALYMGRHAAAGQRDGEIISQIKMTNLALAEIKELLKQQIKEIVFLKNTVME
CEACGMGGMQPRPSCVPNPCHPGVKCMDTPHGIKCGPCPDGMEGNGTHCTDVDECIVKPC
HMGVRCINTSPGFRCGSCPAGYTGPQVQGVGLAYATANKQVCKDINECSTSNGGCVENSV
CMNTPGSFRCGPCKTGYVGDQRRGCKPERACGNGQPNPCHASAECIVHREGKIECQCGVG
WAGNGYLCGPDSDIDGFPDEKLVCPETNCNKDNCLTVPNSGQEDADGDGIGDACDEDADG
DGILNMQDNCVLVPNVDQKNTDEDDFGDACDNCRAVKNNDQKDTDVDKFGDECDEDIDGD
GIPNHLDNCKRVPNTDQKDRDGDKVGDACDSCPYVKNPEQTDVDNDLIGDPCDTNKDSDG
DGHQDSRDNCPAVINSSQLDTDKDGKGDECDDDDDNDGIPDLLPPGPDNCRLIPNPLQED
SNGDGVGDICEKDFDNDTIIDTIDVCPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVVL
NQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMW
KQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNALWHTGDTSEQVKLLWKDARNV
GWKDKTSYRWFLQHRPADGYIRVRFYEGPQMVADTGVIIDATMRGGRLGVFCFSQENIIW
ANLRYRCNDTLPEDFDTYRAQQVQLVA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggtttctggtgctgagctgtgcgctctacatgggacgacacgctgcagcagga
cagagagatggagaaatcatcagtcagattaaaatgacgaaccttgcactggctgagatt
aaagagctcctgaaacaacagataaaagagatagtgttcctgaagaacaccgtgatggag
tgtgaagcctgcgggatgggaggaatgcagcctcgtccctcctgtgtgcccaacccctgt
cacccaggagtgaagtgcatggacacccctcatggaatcaagtgtggaccctgccccgac
ggcatggagggcaacggtacccactgcactgatgtggacgagtgtatcgtgaagccgtgc
cacatgggtgtgcgctgcataaacacctccccgggtttccgctgcggttcctgtcctgct
ggatacaccggccctcaggtccagggcgtcggacttgcctacgccaccgccaacaaacag
gtctgcaaagatatcaatgagtgtagcaccagtaacggaggctgtgtggagaactctgtc
tgcatgaacacccctggctccttcaggtgtggtccatgtaagactggctatgttggggac
cagcgacgtggctgtaagccagagagagcttgtgggaatggccaacccaacccctgccac
gccagcgctgagtgcatcgtccatcgggagggcaagatcgagtgtcagtgtggagtcgga
tgggctggcaacggctacctctgtgggcctgacagtgacatcgacggtttccctgatgag
aaactggtctgtcctgagacaaactgcaacaaggacaattgtcttactgtgcccaactct
ggtcaagaagatgccgacggagatgggattggtgacgcctgtgatgaagacgcagatggg
gatgggatcctcaacatgcaggacaactgcgtgctggtgcctaacgtggaccagaagaac
actgacgaggacgactttggcgacgcgtgcgacaactgtcgtgccgtcaaaaacaacgac
caaaaagacacagacgtggataaatttggtgatgagtgcgacgaagacattgacggggat
ggaatccccaatcacctggataactgcaaaagggttcccaacactgaccagaaagatcgt
gacggagacaaagtgggagacgcctgcgacagctgtccttatgttaaaaaccctgaacag
acggatgtggacaacgacttgattggagacccctgtgacaccaacaaggacagtgacggc
gacggtcaccaagactctcgggacaactgtccagccgtgatcaacagttcccagctggac
accgacaaggacggcaaaggagacgagtgtgatgatgacgatgataacgacggcatcccg
gacctgctgccacctggtcccgataactgccgactgatccccaaccctctgcaggaggac
tctaatggtgacggtgtgggtgatatatgtgagaaggattttgacaacgacaccatcatc
gacaccattgacgtctgtccagagaacgctgaggtcaccctcaccgacttcagggagtac
cagaccgtcgttttagatccggagggagacgcacagatcgaccccaactgggtggtgctg
aaccagggaagagagattgtccagaccatgaacagtgatcctgggttggctgttggctac
actgccttcagcggtgtggactttgaagggacgtttcatgtgaacacggtaacggacgac
gactacgcagggtttatctttgggtaccaggacagctccagcttctacgtggtgatgtgg
aagcaggtggaacagatctactggcaggcaaacccgttcagggccgtggcagaaccaggc
atccaactgaaggccgtcaagtcgaacacgggtccaggtgagaacctgaggaacgccctg
tggcacaccggcgacaccagtgagcaggtcaaactgctgtggaaagacgctcgcaatgtt
ggctggaaggacaagacctcttaccgctggttcctccaacaccgacctgctgacggctac
atcagagttcgtttctacgagggtcctcagatggtggcagacacaggcgtcatcatagac
gccacaatgagaggaggccgactaggagtcttctgcttctcccaggagaacatcatctgg
gccaacttgcgttatcgctgcaacgacacacttcctgaggactttgacacctacagagcc
cagcaggtccagctggtggcctga
DBGET
integrated database retrieval system
