Acanthopagrus latus (yellowfin seabream): 119028557
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Entry
119028557 CDS
T08233
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alat04131
]
119028557 (hps3)
Membrane trafficking [BR:
alat04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
119028557 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
119028557
NCBI-ProteinID:
XP_036970589
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All DBs
Position
11:complement(26003087..26020366)
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AA seq
1042 aa
AA seq
DB search
MVHVYNCHPFSSQQIVQVEQEPGLVCCGGGALFVVATGGCKVEAYSVEREGCPLICRFAT
MGTVKSIQHSKIGDYLVTIEEKNSATYLRAYTNWRYQAEDKARVGVRLLGHLLRGASVRG
GVQMEIIEIPLSERPVAVACCSVTGDLLVGCENTLVLFTLRRQNQQTLQNQSQQILQSTW
PNTQQSSSQSQGQTSTSNQNVSILDFERSVILHLPKIKAKRVALCGGYVAVQAELEVLVL
KLDASSEPKTQEECSETTRADHLEDQADFLLLPRHQELLGDRAKDCDIPVSIEKTGLEDR
GQYTLSYVLFRRFTPDFFQGCSVEETQLHSLQLCPLFTSKQSVSQEEPACVFCFFSLPTA
GYLYSLKGGVELLSAYQYPEKVLEAVLADHLLHVITKSALQCFTVRCAALAARIEDPYID
TTMKACPPCSLEVCALRMQLFIGLRSVCVHGCHVILLSTADTETPEESERATHRRGLSRK
WTISSPKETRTVGHGWNIYVVDTVSPLTLYQEMVEYSQKYAETNPQAQSLRHLLSEAHLL
LRASLLQTGQRQNTEGEPVLSPETDTGGPSEKQTDREELEEALRQNCAQLGDCFSRGSQK
DCHLALPYYRMSALSVTEVIARNRPLPSSPHSYGPGFLFYLKHYLLEEAEQSLSQEEADE
VIDIFSQSEPSQLVSVCASPPMVNISPERTLQILRRLEDTAGVSVPLTITMATMMLLMDD
VPQYTQLMERHAEMLLVYGFIEEPRLLLHGGGGGQHTRVCPTVLTRQLAKSQPGLLVAGM
VALHENNKIQLEQADHIFKELGCENCLQVDFWEAMLMASSQDAVIQELLFRLSSVYIDRL
TNTSSNTHSDHLNTRSRRKSLKSADDLINSCSHYGALYPWLTVLSPAHTTSSQHQEALYK
LQSLLCGPSLSVGSVGPLMERLSEEPLWGFSLHLLCATRRGQYDRSIEKLLDRCPQAIIA
YANHQLQDRNMVLWWQKLLPELCNRTRAAADNGILLAALKETLVVVAMEMSPAEFLELIP
DDGTASYFLPHLLTCSQKHLLA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatcctttctcctcacagcagatagtccaggtggagcag
gagcctgggctggtctgctgtggaggtggagcactgtttgtggtggcgactggaggatgc
aaggtggaggcctacagtgtggagcgggagggctgccctctcatctgtcgctttgctacc
atgggcactgtgaagagcatccagcacagcaagataggagattacctggtgaccattgag
gaaaagaacagtgccacttacctgagggcttacaccaactggcgctaccaggcggaggac
aaggcccgtgtcggggtgcgtttgttgggccacctgctgcggggggcatctgtgcggggt
ggagtgcagatggagatcattgagatccctctgtcagagcgtcctgttgctgtggcctgc
tgctctgtaacaggggaccttctggtcggctgtgaaaacactctggttctgtttactttg
aggagacaaaatcagcaaacactgcagaatcagagtcagcagatccttcagagcacctgg
ccgaacacccagcagagctccagtcagagtcaaggtcagacatcaacatccaaccagaac
gtttccatcctggattttgaacgctccgttatcctgcatctaccaaaaatcaaggctaaa
cgggtggcgctgtgtggaggatatgtggcagtgcaggcagagctggaggtgctagtactg
aaactggacgcatcgtctgaacctaaaacccaggaagagtgctctgaaacaactagagca
gatcatctagaggaccaggctgacttcctgctcctcccaagacaccaggagttgctcggt
gatcgagccaaagattgtgatatccctgtcagcattgaaaagactggactggaggacaga
ggacagtacactctgtcgtatgttctcttcaggcgctttactccagacttcttccagggc
tgcagtgtagaggagactcaacttcactctctacagctctgcccgctgttcaccagtaag
cagtcagtgtctcaggaggaaccagcatgtgtgttctgcttcttctctctacccacggcc
ggttacctgtacagtctgaagggtggcgttgagcttctctcagcctatcagtacccagag
aaggtcctggaggcggtgctagcagaccacctgctgcacgtcataaccaagagtgcattg
cagtgtttcacagtgcgctgtgcagcattagcagccaggatcgaagacccctacatagac
accaccatgaaggcttgtccaccctgcagcctggaggtgtgtgcgctcaggatgcagctg
tttataggtctgcggtcagtgtgtgtccacggttgccatgtcatcctgctgtccaccgct
gacacagagacaccagaggagagcgagcgtgccacacatcgcagaggcctgagcaggaag
tggacaatctcgtctcccaaagaaaccagaacagtgggacacggatggaacatctacgtg
gtcgacaccgtctcccccctcactctttaccaagagatggttgagtacagtcagaagtat
gcagagactaacccacaggcccaaagcctgcggcacctcctcagcgaagctcacctcctc
ctccgagcctccttacttcaaacagggcagcggcaaaacactgaaggagagcccgtgttg
tctccagagacggacacaggcggaccatctgagaagcagacagacagggaagaactggag
gaggcgttgaggcagaactgtgcacagctgggagactgtttcagcagggggagtcagaag
gactgccacctggctctgccatactacaggatgtctgctctgtcggtcacagaggtgatt
gccaggaaccgcccactacccagcagccctcactcatacggccccggcttcctgttttac
ctgaagcattacctgttagaagaagcagagcagagcctcagtcaggaagaagctgatgag
gtcatagacattttcagccaatcagagccctcgcagctggtcagtgtgtgtgctagtccg
cccatggtaaacatcagtcctgagcggacgctgcagatcttacggcgcctggaggacaca
gccggcgtgtccgtcccgctgacaatcaccatggcgaccatgatgctgcttatggacgac
gtgccgcagtacacacagctgatggaaagacacgcagagatgctgctggtgtacgggttc
atcgaggagccgcggctgctgctacacggtggaggtggaggccagcacacacgcgtctgc
cccacagtgttgactcgccagttggcaaagtcccagccggggctgctggtggctggcatg
gtagctctacatgagaacaacaagattcagctggaacaggctgatcacatattcaaggag
ctaggctgtgagaattgcttgcaggtggatttctgggaggcgatgctcatggcctcctca
caggacgccgtcattcaggaactgctgttcagactgtcttctgtctacatcgaccggctg
acaaacacatcctctaatacacactcagaccatctgaacacacgttcaagacgcaagtcg
ctgaagagcgccgacgatctgatcaactcgtgctcccactacggcgctctgtacccctgg
ctcacggttcttagtccagctcacactaccagctcccagcaccaggaggcactatacaaa
ctgcagtctctcctgtgtggtccatcactgtctgtgggctccgtcgggcctctgatggag
cgtctgtcagaggaacccttatggggcttcagcctgcacctcctctgtgccaccagaagg
gggcagtatgacaggagcatcgaaaagctgctggaccgatgtcctcaggccatcatagcc
tacgccaatcaccagctgcaagacagaaatatggtgctgtggtggcagaagctgctccct
gagctctgcaacagaacgagagccgctgcagacaatggcatcctattggctgctctcaaa
gagacgctggttgtggttgccatggagatgagccccgcagagttcctggagctgatacct
gacgacggcacagcctcgtactttctgccccacctgttgacatgcagtcagaaacacctg
ctggcctga
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