Acanthopagrus latus (yellowfin seabream): 119028616
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Entry
119028616 CDS
T08233
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04810
Regulation of actin cytoskeleton
alat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119028616 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119028616 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119028616 (cyfip1)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119028616 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
119028616 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
119028616
NCBI-ProteinID:
XP_036970710
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All DBs
Position
11:complement(6082416..6111840)
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AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQGYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHTERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSTTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSANYALTKFRKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALHKSL
ELAINRFESEDLTSIMELEGLLDINRLTHKLLSKYLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPHYLYGSKTLNLAYSS
IFSTYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIIALLGQHRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQVLNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagtgactttagaggatgctctctccaacgtggacctgctggaggagctg
ccactcccagaccagcagccatgcatcgagcccctcccctcctccgtcatgtatcagccg
aacttcaacaccaactttgaggaccgaaatgcctttgtcaccggcatcgccagatacatc
gagcaggccaccgtccactccagcatgaatgagatgctggaggaggggcaggggtacgcc
atcatgctctacacctggaggagctgctcacgtgcaataccacaggtgaaatgcaacgaa
caacccaacagagtggagatctatgagaagacagtggaggtcctggagcccgaagtcacc
aagctgatgaatttcatgtactttcagcgcacagcgatcgaccgtttctgcggagaagtc
cgtcgcctgtgtcacaccgagcgcaggaaagactttgtctccgaggcctacctgctcaca
ctcgggaagttcatcaacatgttcgctgtgctggacgagctcaagaacatgaagtgcagc
gtcaagaacgaccactccgcctacaaaagagctgctcagttcctcagaaaaatgtctgag
ccatcatccatccaggagtctcagaatttgtccatgttcctggcaaaccacaacaaaatc
acacagtctttgcagcagcagcttgaagtgattaatggatatgaagaactgctggcggac
atcgtcaacctgtgcgtggattactacgagaacaagatgtacctgactcccagtgagaaa
cacatgctgctcaaagtaatggggtttggcttgtaccttatggacggaaacagcagcaac
atctacaaactagatgccaaaaagagaatcaacctgaccaagattgacaagtttttcaag
caactccaggtggtccctctgttcggtgacatgcagattgagttgtctcgttacatcaag
accagtgcccactttgaagagaacaaatccaggtggacttgcacatctatatccagcagc
cctcagtacaacatctgcgagcagatgattcagatccgcgaggatcacatgcgcttcatc
tcggagcttgctcgctatagcaacagtgaggtggtgaccggatcagggcgtcaggaggcc
caaaagacggatgcagagtacaggaagctgttcgacttggccctgcagggcatgcagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcctggaaactggttcatccgact
gacaaatactctaacaaagagtgtcctgacaacgctgaggagtacgagagagccaccaga
tacaactacaccagcgaggagaaatttgcccttgtggaggtgatggcaatgataaaggga
ctacaggtgctgatgggacgcatggagagtgtgttcaatcacgccatccgccacaccatc
tactcggctctgcaggactttgctcaagtcaccctgcgtgaccccctgcgacaggcgatc
aagaagaagaagaatgtcatccagagcgtcctccaggccatccggaaaacggtgtgtgac
tgggagaccggccgggagccccacaacgaccccgccctccgcggagaaaaagatcctaag
ggtggcttcgatatcaaggttcctcgccgtgcagtggggccctccactacacagctctac
atggtgaggaccatgctggagtctctgatcgcagacaaaagcggctctaagaagactctg
cgcagcagtctcgaaggccccaccatcatggacattgagaagtttcaccgcgagtccttc
ttttacacccatctgctgaacttcagtgagaccttgcagcagtgttgtgatctttcccag
ctctggttcagggagttcttccttgagctcacaatgggccgcaggatccagttccccatt
gaaatgtccatgccctggatcctcactgaccacatcctggagacaaaggaagcgtccatg
atggagtatgtgctctaccccctggacttgtacaacgacagtgcaaactatgccctgacc
aaattcaggaagcagttcctctatgatgaaatagaggctgaggtgaacctgtgctttgat
cagtttgtctacaagctggctgatcaaatatttgcctactacaagatcctagctggaagt
cttctgcttgacaaacgtttaagagccgactgcaagaatcaaggggccaacattccctgg
ccggcgtccaaccgctacgagacacttctgaagcaacgccacgtccagcttctaggccgc
tccattgatctgaacagactcatcactcagagggtttcagctgcccttcacaagtctcta
gagctggccatcaatcgcttcgagagtgaggacctcacctctatcatggaactggaaggt
cttctggacatcaaccgcttgacacacaagctcctcagtaagtacttgacgctggacagc
atggacgccatgttccgtgaggccaaccacaacgtgtcggcgccctacggcaggataacg
ctgcacgtcttctgggagctcaattatgacttcttgcccaactactgctacaatggctcc
accaacaggtttgtgcgcactgtcctgcccttctctcaggagttccagagggacaagcca
cccaacgctcagccccattacttgtacggctcaaagaccttgaacctggcgtacagcagc
atatttagcacctacaggaatttcgtcggtcccccgcacatcaaggtgatgtgcagactt
ctgggttaccagggcatcgcggtggtgatggaggagctgctgaaggtcgtgaaaagcctg
cttcagggcaccataatgcagtatgtgaagaccctgatggaggtgatgcccaagatctgc
agacttccccgccatgagtacggttccccaggtatcctggaattctttcaccaccagctg
aaggacattgtcgagtacgctgagctgaagacggtgtgtttccagaacctgagagaagtg
ggcaacgccctcctgttctgtctgctgagcgaacagagtctgtcacaggaagaagtttgt
gatttgctgcacgctgcaccttttcagaacattctgccaagagtccacgtcaaagaggga
gaacgccttgatgccaagatgaagcggctggaagccaaatacacagcgctgcatatggtt
ccgctgatcgagcgccttggcaccccacagcaaattgccattgctcgtgagggcgacctc
ctgaccaaagagaggctgtgctgcggtctgtccatgttcgaggtcatcctcacacgcgtg
cgaggcttcttggacgaccccatctggcgggggccgctgcccagcaacggcgtgatgcac
gtggacgagtgcgtggagttccaccgcctctggagtgccatgcagttcgtgtactgcatc
cctgtgggagcccacgaattcacagtggagcagtgcttcggggacggcctccactgggcc
ggctgcatgatcatcgccctgctggggcaacacagacgcttcgacatcctcgacttcagc
taccaccttctcaaggtgcagaagcacgacggcaaggatgaggtcatcaagagtgtgccg
ctgaagaagatggtcgacagaatccgcaaattccaagtcctcaacaacgagattttcgcc
atcctgaacaagtacctgaagtctggagacggagagaacatgccggtggaacacgtccga
tgcttccagccaccgatacaccagtcgctcgccagcagctga
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