Acanthopagrus latus (yellowfin seabream): 119028698
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Entry
119028698 CDS
T08233
Symbol
si:ch73-61d6.3
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03272
Virion - Hepatitis viruses
alat04514
Cell adhesion molecules
alat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119028698 (si:ch73-61d6.3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119028698 (si:ch73-61d6.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119028698 (si:ch73-61d6.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alat01009
]
119028698 (si:ch73-61d6.3)
Protein phosphatases and associated proteins [BR:
alat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119028698 (si:ch73-61d6.3)
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GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
AAA_13
Spectrin_Anc-1
DASH_Dad1
Keratin_2_head
DUF349
DASH_Dad2
FapA
DUF6779
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
119028698
NCBI-ProteinID:
XP_036970841
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All DBs
Position
11:21308862..21329708
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AA seq
542 aa
AA seq
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MFDKQRYDSPPVYSPPFTSPSNNGFVPPGSFHAPQSDYNQYPPPPGSYYIEEKPQHFYKL
LSPPGIVKAMMGTVIVLCVAIFACVASTLMWDMQYGMGMGLGYGSGYGSYGSGYGGGGYG
GYGSYGGYGYGSSYGSYISPYSAKTAMIAMAAINFIGALAFFIAGFSKSNTVRCRKFFLA
LLISSVIMAVLQGIITIVYIVGVNPMAQSTSSMMYNPMLMMCQNLYQTSYSQMGGVGGFP
IYNQYLYHYCFVDPQEGVAMVCGFLVVIALCVAAFFAQKTRGKIWRYGKPNIYWEEPLVG
GKASEGRDVEEWVNNVEESRSVQDAPTLLVSEKGAGLLNASANSVISYPPVKVDSSSYNE
YDCDNNEYSERTTSRPSEVFSHGGGTSSSPSEETGRKPSANRGKRRRRKPDFDESQYETE
YTTGGETGNELDGEEWESSYPEIRSDAVRQEYKREFDADLREYKRLCAEMDDINDQLNKL
SRQLDTLDETSAKYQAVADEYNQLKDLKQTSDYQLKKKQCRRLRHKLFHIKRMVKDYDKN
HS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagcagcgctacgacagtccacctgtctacagtcctcctttcacctcgccg
tccaacaatggctttgtccctccagggagcttccatgccccccagagcgattacaaccag
tacccacctccaccaggatcttactacatcgaggaaaaaccgcagcacttctacaaatta
ctatcacctccggggattgtcaaggccatgatgggtacagtgatcgtattgtgtgtggcg
atattcgcctgcgtggcctccactctcatgtgggacatgcagtatggaatgggaatggga
ttgggctacggcagtggatatggcagctacggttcaggatatggtggtggcggctatggt
ggttatggaagttatggaggctatggctacggcagcagctatggctcctacatctcacct
tactcagccaaaactgccatgattgccatggcagccattaactttattggggctctggcg
ttcttcatcgctgggttctctaaatccaacacggtccgttgtaggaagttctttctggcc
ctcttgattagcagcgtcatcatggctgtcctgcagggcatcataaccattgtctacatt
gttggggtgaacccaatggcccagagcacctccagtatgatgtacaatccgatgcttatg
atgtgtcagaacctctaccagaccagctactcacagatgggaggagtgggaggcttcccc
atttacaaccagtatctttaccattactgctttgtggacccacaggagggagtcgccatg
gtgtgtggattcctggttgtcatcgccttgtgtgttgccgctttctttgcccagaaaaca
agagggaagatctggcgttatgggaagccaaacatctactgggaagagccgcttgttggt
gggaaagcctcagagggcagagatgtagaggaatgggtgaacaatgtggaggaaagccgc
agtgttcaggacgctccgaccctgctggtgtcagaaaagggagctgggctgctcaacgcc
tcggccaacagtgtcatctcctacccaccagttaaagtggacagcagctcttataatgag
tacgactgcgacaacaatgagtactctgagaggaccaccagcagaccatcagaagtcttc
tcccacggtggaggaacgagctccagcccctcagaggagaccggtcgcaagccctccgct
aacaggggcaagagacgcagacgcaaacccgactttgatgagtctcagtacgagacagag
tacaccacaggaggagaaacaggcaatgaacttgacggagaggaatgggagagttcatac
ccagagataagatccgatgctgtgcgccaggagtataagagagagtttgacgccgacctc
agagaatacaagcgcctgtgtgctgagatggacgacatcaatgatcagttgaacaaactc
agccggcagctggacacactggatgagacatcagccaaataccaggctgtggcagatgaa
tataaccagctgaaggatctgaagcagacgtcagactaccagttgaagaagaaacagtgt
cgtaggctgagacacaaactgttccacatcaaacgcatggtgaaggactacgacaagaac
cactcataa
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