Acanthopagrus latus (yellowfin seabream): 119028751
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Entry
119028751 CDS
T08233
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03420
Nucleotide excision repair
alat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119028751 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
119028751 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
alat03051
]
119028751 (rad23ab)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119028751 (rad23ab)
Proteasome [BR:
alat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
119028751 (rad23ab)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119028751 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
Dsc3_N
CUE
UBA_2
DUF1421
UBA_9
Ubiquitin_2
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
119028751
NCBI-ProteinID:
XP_036970903
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All DBs
Position
11:complement(31108295..31131124)
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AA seq
457 aa
AA seq
DB search
MLTITLKTLQQQTFQIEIEAELTVKALKEKIEEDRGKDAFPAAGQKLIYAGKILNDDTPL
KEYKIDEKNFVVVMVTKPKAVPSPQAASQPTPQPAPAPHSAPGPTQVPSTPTHTVSEPTP
APQSVPSSEFPPPAPENSQSASVEATAVRDLGTVPDSAPASAPATIPASAPALVLEAGQT
APASAPADCPTPAAQPQEKPREDPESQPSSTAPVHSSAASLVDELGLLEEAASILVTGPA
YENLVSEIVSMGYDREQVVAALRASYNNPDRAVEYLLMGIPAEASDLPPQEPVGHTTAQQ
PRQPPTASNTGPVSGSQPPSAGGGSVSTGNPLEFLRNQPQFQQMRQIIQQNPSLLPALLQ
QLGRDNPQLLQQITQHQERFVQMLNEPRVGDTGGEGAEAQGSPPTNYIQVTPQEKEAIER
LKALGFPEGLVIQAYFACEKNENLAANFLLQQTWDDE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataacactgaagaccctccaacagcagacctttcaaatagaaatagaagca
gaattgacggtgaaagccctgaaggagaaaatagaggaggacagaggaaaagatgcgttt
cctgctgcgggacagaaactcatctatgcaggcaaaatcttaaatgatgataccccactg
aaggagtacaaaattgacgagaaaaactttgtggttgtcatggttaccaagcctaaagca
gtcccttctccacaagccgcctctcagccgactccccagccagctccggctccacattca
gccccaggcccaacacaagtgccctccacaccgacacatacagtgtctgaacccacacct
gccccacagtcagtgccttcctctgagttcccgcccccagccccagaaaacagccaatct
gcttctgttgaagcaacagcagttcgggatttaggcacagtcccagactcagctccagcc
tcagctccagctaccattccagcctccgccccggctcttgttcttgaagctggtcagacg
gcgccggcctctgcccctgcagactgccccacccccgctgcccagccacaagagaagcca
agggaagacccagagagtcagccatcttccactgcaccagtccactcctctgctgccagc
cttgttgatgaactgggtctccttgaagaagcagcatcaatactggtgacaggtccagcc
tatgagaatctggtgtcagagattgtgtcaatgggttatgaccgggagcaggttgttgct
gcactcagagccagttataacaacccagaccgagcagtggaatatctactcatgggtatt
cctgcagaggccagtgatcttccacctcaggagcctgttggacacactactgcacaacaa
ccacggcagcccccaacagcctcaaacacaggtccagtgtctggcagccagcctccctct
gctggtggaggctctgtctctacagggaaccctctggagttcctgaggaaccagcctcag
ttccagcagatgagacagatcatccagcagaacccatccctcctcccagctctgctacag
cagctaggaagagacaacccacagctgctgcagcaaatcacgcagcaccaggagcgcttt
gtgcagatgctgaatgagccacgagttggagatactggaggggaaggggccgaggcccag
gggtcaccacccaccaactacatccaggttaccccacaggagaaggaggctattgagagg
ttgaaagcgctgggtttccctgaaggcttagtcatccaggcttactttgcctgtgagaag
aatgagaatctggctgctaacttcttactacagcaaacgtgggatgatgagtag
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