Acanthopagrus latus (yellowfin seabream): 119029094
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Entry
119029094 CDS
T08233
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119029094 (pcdh10a)
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119029094 (pcdh10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4832
Motif
Other DBs
NCBI-GeneID:
119029094
NCBI-ProteinID:
XP_036971578
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All DBs
Position
1:25977239..25999136
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AA seq
1053 aa
AA seq
DB search
MIRLIFLLSILDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALLVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGNKFAE
LVLEKSLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQTVYSVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSSHNAPRIKDLFNIDARTGRIEVAGEVDYEES
STHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSGENGHMSCEILGDVPFKLKSSFKNYYTIVTDGPLDRENTDAYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAAELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVMLVDSVVE
GRSGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRQARGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPTRSTDTDHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
SSVNLSEQLTMTSSTASSSDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYESSLGPYDFGLVQHRY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatccggttaatattcctgctctccatcctggatggagctgtctcccagctgcactac
tccgtgccagaggagcaggagccgggctccgtggttgggaatatcgcagaggatttgggg
ctggacattaccaaactttccgctcgccgcttccagacggtgcctagttcacgaacacct
tacctggaggtgaacttggagaacggtgcgctcctggtgaaggagaaaatcgaccgggaa
gaaatctgtaagcagaccatcccgtgcctactgcacctggaggtgtttctggagaacccg
ctggagctctttcgcgtggagatcgaggtgatggatatcaacgacaatccgcccagcttt
cccgagaccgacatttccgtggagatatcggagagcgccatccccgggacccgtttcccg
gtggagaacgccttcgacccggacgtgggcacaaacgcgctcagcacatatgccataacg
aataataactatttttaccttgacgtgcagacgcagagcgacgggaacaagttcgcggag
ctggtgctggagaagtcgctggacagggagcagcaggcggtgcaccgctacgtgctgacg
gcggtggacgggggcatcccgcagcggaccgggacggcgctgctggtcgttaaagttctg
gactcgaatgacaacgcgcccacctttgaccagactgtgtactcggttaacctgcgggaa
aactcgcccgtgggcactctggttatccagctcaacgccacggatgttgacgagggacag
aacggggagatagtttattccttcagcagccacaacgccccgcggataaaggacttattc
aacatcgatgccagaacaggtaggatagaggtggcgggtgaggtggactacgaagagagc
agtacgcaccagatttacgtccaggcgaaagatctgggggctaacgcggtccccgcgcac
tgcaaagtgctggtcaaactcgtggacgtgaacgacaacacaccggagataggtttcagc
accgtgactgaatccgtaagcgagcaggacgccccgggcaccgtgatcgcacttttcagc
gtctcggaccgggactccggcgagaacggacacatgagctgcgagatcttaggagacgtc
cctttcaagctgaaatcctcttttaaaaactactacaccatcgtgacggacgggccgctg
gacagagagaacacagacgcctacaccatcaccgtggtggccaaagataagggtcagccg
tcgctcgccaccagcaagtccattaaagttcacgtctccgacgagaacgacaatgcgccc
cgttttacgcaggcggtttatgatgtgtatgtgaccgagaataatgtgcccggtgctttc
atccacgctgtgagcgctttggaccctgatataggacagaacgctcttattacctactcc
atattggagtgtgacatacagggcatgtccgtggacacctatgtgtccataaaccaggac
accggctacctttacgcgctgcgctcttttgattacgagcagctgaaggagtttagtttc
atggtccaggctaaagactctggtgccgctgagctcttctccaatgctactgtaaatgtg
atcatagtagaccaaaacgacaacgctcctactgtaatagcccccatcggtaagaacggc
acagccaaagagcacttgccgcgctccgcggagcccggctacctggtgacgcgcatcgtg
gccatggatgcggatgatggcgagaacgcacggctgtcctacagcatcctgcggggcaac
gagatggggatgttccgcatggactggaggacaggggagctgaggacagcccgcaggatc
tctccaaagcgggacccgcagggctactacgacctgctgatcgaagtgagggaccacggg
cagccccctctgtcctcctcggccagtgtgagcgtgatgttagtggacagcgtggtcgaa
ggccgcagcggggatcgcggctcggcctccaaggcgaaggagacctccctcgacctcacc
ctcattctcatcatcgccttgggctccgtgtccttcatcttcctgttggccatgatcgtg
ctggccgtgcgctgccaaaaggacaagaagctcaacctgtacacgtgcctgctggccggt
gactgctgtctgtgctgcggctcgtgctgcagcaggcaggcccgcggccggaaacagaag
aagctgagcaaatccgacatcatgttagttcagagcaccaacgtgacgtcaggggtcgga
cccgtggggcaggtgcccgtagaggagtccggggtgggcggcgtgggagggggcttcggc
tcccaccaccaccagaaccagaactcctactgctaccaggtgtgtctgacaccggagtcc
gccaaaacggacctgatgttcctgaaaccgtgcagcccgacccgcagcactgacactgac
cacaccaacccctgcggcgccatagtcacgggttacagtgaccaacaaccggacatcata
tccaacggcagtattctctctaatgagacgaaacaccaacgagcagaactcagctatctg
gtggacagaccgagacgcgtcaacagctcggcgttccaagaggcagacatcgtcagctcc
aaagacagtggtcacggcgacagcgagcagggcgacagtgaccacgatgccaccaaccgg
ggtcactcggccggcgctgacctgttctccaactgcacggaggagtgcaaagccctgggc
cactccgaccgctgctggatgccgtccttcgtgccgtccgacgggcgccaggggccggac
taccgcagcaacctgcacgtccccggcatggacgccacgctgcccgacactgaggtaccc
tcctccgtcaacctctccgagcaactcaccatgacctcgtccaccgcctcgtccagcgat
aggtcattctccacctttggcaaggacggtcaaaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaacccacctttctctgtgagtatcagtatgaaagttcc
ctgggaccctatgacttcggtctggtccagcacagatactaa
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