Acanthopagrus latus (yellowfin seabream): 119029105
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Entry
119029105 CDS
T08233
Symbol
her6
Name
(RefSeq) hairy-related 6 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03460
Fanconi anemia pathway
alat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119029105 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119029105 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119029105 (her6)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119029105 (her6)
Transcription factors [BR:
alat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119029105 (her6)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
119029105 (her6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
119029105
NCBI-ProteinID:
XP_036971597
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All DBs
Position
11:17223377..17225606
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AA seq
277 aa
AA seq
DB search
MPADMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHQHPLPSTAGPTHPSFGQSM
VQIPSSSPQVLPMNAVSCKGGSSPANLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNVGTPVPVPAAVSPGAPSGNSDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatgatggaaaaaacctcctcctccccggtcgctgcgaccccggcaagc
atgaacacaactcccgataaacccaagacagcatccgagcacagaaagtcatccaagcca
attatggaaaagaggagaagagccaggatcaacgagagcttgggccagctgaaaactctc
atcctggatgcgctcaaaaaagatagctccagacactctaaactggagaaggcggacatc
ctggagatgacggtgaagcatctccggaacctccagagggctcagatgaccgcagccctg
aacacggaccccacagtcttgggaaaatatcgtgccggtttcagcgagtgcatgaatgaa
gtcacccgcttcctgtccacctgcgagggtgtcaacaccgaggtcaggacgcggctcctc
ggccacttggccagctgcatgacccagatcaacgcaatgaactaccccagccagcatcag
caccagcacccgctcccatccaccgccggaccaacccacccctccttcggccagtccatg
gtgcagatccccagctcgtccccgcaggtcctgcccatgaacgcggtgtcctgcaaagga
ggctcgtcgccggctaatttaccctcagacgccaccaaggtgtacggtggtttccagatc
gtgcctgccacagacggacagtttgcattcctcatacccaatgcggcatttgcgccgaac
ggccccgttatcccggtgtacgccaacaacgtgggcacgccggtccccgtgccggccgcg
gtttcccccggagccccgtcaggcaactcggactcagtgtggcgaccgtggtga
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