Acanthopagrus latus (yellowfin seabream): 119029141
Help
Entry
119029141 CDS
T08233
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119029141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119029141
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119029141
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119029141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8_fungal
zf-UDP
PHD_NSD
WWE_5
zf_RING_Vps8
zf-ANAPC11
Exog_C
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
119029141
NCBI-ProteinID:
XP_036971670
LinkDB
All DBs
Position
1:complement(29040774..29087262)
Genome browser
AA seq
759 aa
AA seq
DB search
MDYLANNNNMLLASAVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSSDPRGGSVVLGQVDS
RLSPYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQWEWENDAGTWTPYDMEVAI
AIENAHNRKQPCLDLTPLGFCYLIDFQNMTQVNRQSQRCRRLQRRADMTYPLVSGPLPVP
KGGGVGGGGGLTGALLGVGVSGTGLGIGSSVYPNGGLPTTGLGQPCSCQQCMLVLSVKTN
TGGAGGGGAGIQTLGRRSLTMQRTKNTASITSKPLSPSKSATLGQGQQQNSNSNSNYYQT
LPHGLAISRNTASPRRNAQLFAQSLAALTAGTSSLGISSSVNRPPPPSLPPPQPPSSNPN
VNPPSIPPKHSSSASEPVPTGTLISPASSVTTPPSPVPSPSPVVMKPQRTPSSAANVCHA
PLPQRSSLAGLSRPTLQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSA
AALPVCLTRPPKLVLHPPPVSKSDIKPVPGFGHCCRKTTKKQARKGKTPEEVVKKYLQKV
KSSPEEDCTICMEPLGGPSGYKGPGVGPVSRAESVGRLTQCGHQYHFQCLVAMYNNGNKD
GSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSIPGHPDCKTIRIIYNIPPGIQGPEHPNP
GKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSSTTGESDTVIWNEVHHK
TEFGSNLTGHGFPDPGHLDNVLEELRAQGIEEDDGLMEK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggattatttggccaacaataacaacatgctcctggcttctgccgtggtggtgtgggaa
tggctgaacgaacacggccggtggcggccctacagccccgctgtctcccaccagatagag
gcggccatccggagcagcgacccccgcggagggagcgtggtcctcggccaggtggacagc
cggctgtcgccatatataatagatctccagtccatgcaccagttcagacaggacacagga
accatccgtccggtgcgcaggagtttttatgacccagcctcagccccaggtcagggctgg
cagtgggagtgggaaaacgatgccggtacgtggacaccctacgacatggaggtggccatt
gccatcgagaatgcccacaaccgcaagcagccctgccttgatctgacaccactcggcttc
tgctacctcattgacttccagaacatgacacaggtgaatagacagagccagaggtgtcgc
aggctccagagacgtgctgacatgacataccctttagtgtctggtcctctcccagtaccc
aaaggaggaggtgtaggagggggtggaggcctaacaggagccctgcttggtgtcggagtg
tcggggaccggtttggggattggtagctctgtctaccccaatgggggcttaccaacgact
ggactgggccaaccttgttcctgtcagcagtgcatgctggtccttagtgtgaagaccaac
actggaggagcagggggaggaggagcaggcatacaaactctaggtagacgctcactaacc
atgcagcgaaccaagaatacagcatccatcacctccaaacctttgagtccatctaaatca
gccactctaggacaaggacagcagcagaactcgaattccaactccaactactatcagacg
ctgccacacggccttgccatttccagaaacactgcctctccacgaaggaacgcccagctc
tttgctcagtcgttggctgccctcactgccggcacctcctctctgggtatctcctcgtct
gttaacaggcctcctccgccatccctaccacctcctcagcctccatcatccaacccaaat
gtgaatcctccgtccattccacccaagcactcctcgtcagccagtgaaccggtgccaacg
ggaacattaatttcccctgccagcagtgtgaccacgcccccctctcctgtgccctctccg
tcgccagtggtgatgaagccacagcgcacgccttcatcggcagcaaatgtgtgccatgct
ccgttaccacagagatcgagcttagctggactgagcagaccaacgttacagaggattgca
atggcccagtccagagcgctaatagcatcaggtgtgcccaccgtccctgtgaagaacctc
aatggatccagtcctgttcaccctgcgctggctgggatcacaggtatcctgatgagtgcg
gcggctctgcccgtgtgtctgaccagacctcctaaacttgtgctgcaccctccgcctgtc
agcaagagcgacatcaaacccgtaccaggctttggccactgctgcaggaagaccaccaag
aaacaggctcgcaagggtaaaactccagaggaggttgtaaagaagtacctgcagaaagtg
aaaagttcaccagaggaggactgtaccatctgtatggagccgctggggggtccgtctgga
tataagggtccaggggtggggcctgtgtctcgggcagagtcagtcgggcgactaacacag
tgtggacaccagtatcatttccagtgtctggtggccatgtataataatggcaacaaggat
ggcagtcttcagtgtcccacctgtaaaaccatctatggcgtaaagacaggcaaccagcca
gcagggaagatggagtaccacgtcatccctcactctataccagggcatcctgactgcaaa
accatacgcatcatctacaacataccaccaggcattcagggaccagagcatccgaaccca
ggaaagcccttcactgccagaggctttccccgacactgctacctcccagacagtgagaaa
ggacgcaaggtactcagactgctcctggtagcgtgggaccgcaggttgatcttctcagtt
ggtacttcaagcactacaggagagtctgacaccgtcatctggaacgaggtccaccataag
acagagtttggctccaacctgacgggccacggcttccccgaccccggacaccttgacaat
gtcctggaagagctgcgagctcagggcatcgaagaggacgatggactgatggaaaagtga
DBGET
integrated database retrieval system
