Acanthopagrus latus (yellowfin seabream): 119029191
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Entry
119029191 CDS
T08233
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
alat04990
]
119029191 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
alat04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
119029191 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_1st
NACHT
WD40_MABP1-WDR62_2nd
Beta-prop_EML
AAA_16
NPHP3_N
NBCH_WD40
DUF4062
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WHD_NWD1
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Beta-prop_VPS8
AAA_22
Beta-prop_SCAP
nSTAND6
Beta-prop_LRRK2
AAA
Viral_helicase1
Bac_DnaA
NPHP3
TniB
AAA_35
ATPase_2
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
119029191
NCBI-ProteinID:
XP_036971746
LinkDB
All DBs
Position
11:744884..758196
Genome browser
AA seq
1652 aa
AA seq
DB search
MAEHRAGGAAGAAGAAGAGEVSLQDVLRGRTGGAQRMKTSSNMIRVFVSSTFTDMSSERK
ALLERSYPEVLAFCRSLGLVFEVVDLRWGIRGDVSGDHEASEIFLQEIRSCKKISAGPTF
IALLGNRYGHRGLPRLILEKQFEVLLSKLARNPEGIEQLNHWFLKDNNAVPPTYVLQPVT
AHFPHYSDLRPECGPQRDKNVLSWHLTETQLLQLLRSAATDAEAAGDITAEQKHDFFTSV
TEQEFKEGLWKDAPEASALLFVREIPRQKARDGPKRFAKFMDLTADGLLDAEAQGLLTGL
KSRLYAKSQKILNLHCVELSKGSIDPKRKEHAQYLDGVCELFVSQMKARIEAAVDPSVDG
RHRRIWGNTEEEKGEISDWLVEEVAWHTTVSAELCRDLYGREGLLGKLCLAMWESTNVRH
GPLVVHGAAGMGKTALLSKLAQEMRSVLDAGAVVVIRLLSARHPQRLDIDQVLRSICFQI
CLACGLTPPSPLTANTYLELLRFFRNVLSEVSQQGNTLLILLDALDQLSDQHHAHKLHWL
PASIPPNVHLVVSTGTNSEVFANMRLKFGTSGSFFEVERLSRDDGRQIVESYLRACQRTL
TPEQSVAVLNSFEPTGCPLHLKLILSVARRWTSFTPLTGLRLGANLHEMMSQLLLMLEDK
HGKELVGGALTYIALAREGLLEAELRDVMSLDDDVISAVYRYSLPPTPSLIRLPPFLWAR
LRRDLEDQLEERWTGGVATIGFNSRRLCEAVSARYLTSEQRGRSLRILAEYFLGRWSGKL
KPAALPGLSLLLSDRKVPPQPLWFAPGLANVRKLQELPHHLLHAGLWDELRQEVIGSAEW
LYCKSRVCGVSTVIQDLDQCSQYMDCTETRLVRDALVLMKPSLDFLDGHMDMSLFYTELL
ARLCSLATPFPSMIGQLCSQCEEWLLTCPEPILLPKCSFLQQPGGALQRTLTGLTGGVLC
MDVSVEAELLLAGSDDGVVAVWSLADQQLIHCLLGHTGAVLSVKVIDSSSHCLSLAADGS
LRRWSLMDGQQLLCIQEAVPIDSAPSSVHLHLCEQNQVLFVHSCTQVKVLKLDGSELLSS
SSSSDDGGSVVLGVLGDSVFSLCGSGRVRICHPVSGTQTVETQLENCQGGLTVVKSATLP
KHGKVFIVSADGVLHQVSRSGRQTAAEFPLVPSLLSVTEDEKILIAGSDRTLSLFNVDQD
SVDRFLDLQHEDSVLSACVSSDCRLLVSGAADQLIRIWSVTTGALLDSLCGSDSPVTSLA
LYNNLVISASAAAAGVHLWSLKYDTRHKPVAHIPAGCAHVAITKDTDRVFYVRQQSQTEV
ISWNNLTGSLSERLAVSAQVCCLELAQNKRLLLCGLTTGTVLIYPLALPQETLCIPPPES
LSRVLCLAVSPQEKHVAVAYEDSVRLFEITTRDSFPTVEGPLKGFPLSLLHGPPSSMALL
SNRWLLYGTSCGEVKLHDFSSGSSSDLEPHRSRVTCVTGSTWGTHALVGSEDAVQRLWAL
NPLVLDHTMEYKGFFFEGVLSAAFSDSDQFVFTGSQDRTVKVWDVSSGKLLYVQYVYAPV
VRMVTFRNGFVALSQQGAVIKEVFRCPDHVSPDYNPLRNVKAQYRVTSREKTRDDQQSTA
SDLKDFNPAQFNLNLMGMLRSKPSSSSTCLIL
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcatcgagcaggaggagcagcaggagcagcaggagcagcaggagcaggagag
gtcagcctgcaggacgtcctgaggggacggacaggtggagctcagaggatgaagaccagc
tccaacatgatccgagtgttcgtcagctccacgttcacagatatgagcagtgagagaaaa
gccctgctggagagatcttacccagaagtccttgctttctgtcgcagtctggggctggtg
tttgaggtggtggatctgcgttgggggattcgaggcgacgtgtctggagaccacgaggcg
tctgagatcttcctgcaggagatcaggagctgcaagaagatctcagccggtccgactttc
atcgctctgctgggaaaccggtacggccaccgaggtcttcctcgcctcatcctggagaag
cagtttgaagttcttttgtccaaacttgccagaaaccctgaaggcatcgaacagctgaat
cactggttcttaaaagacaacaatgctgtcccgcccacctacgtcctccagccagtcacg
gctcacttcccccactacagcgacctgcgacctgagtgtgggcctcagcgggacaaaaat
gtcctttcttggcatttaacagagactcaactgttgcagctcctacgctccgccgccacg
gacgccgaggcagccggtgacatcacagctgagcagaaacacgacttcttcacatcagtc
acagagcaagagttcaaggagggtttgtggaaggacgcccccgaagcctcggctctgctc
ttcgtccgagagattccacgtcagaaggcgagggacggtcccaagcgttttgccaagttc
atggatctgaccgccgacggcctgctggatgcagaagctcagggactcctcaccggcctg
aagtcccgcctctacgccaagtcgcagaagatcctcaacctgcactgcgtggagctcagc
aagggaagcatcgacccgaaacgcaaagagcacgctcagtacctagacggtgtctgcgag
ctgttcgtctcacagatgaaggccaggatcgaagcagcagtggatccgtcggtggacggg
aggcaccggaggatttggggaaacacggaggaagaaaagggagaaatctcagactggctg
gttgaggaggttgcatggcacacgactgtgagcgccgagctctgcagggatctctatggc
agggaggggcttctgggtaagctctgcctcgccatgtgggagtcaactaatgtccgccac
ggcccgctagtggtgcacggggcagctgggatgggtaagacggctctgctgagcaaactg
gcgcaggagatgcgtagcgtcctggatgccggggcggtggtggtgatcaggctgctgtcg
gctcgtcatcctcagagactcgacatcgaccaagtcctccgcagcatctgcttccagatc
tgtctggcctgtggtttgactccaccctcgccgctgacggccaacacttacctggagctg
ctcaggttcttcaggaacgtcctctcagaggtttcccagcagggcaacactctgctcatc
ctcctggacgctctggatcagctctcagaccaacatcacgcccacaaactccactggctg
ccagccagcatcccgcccaacgtccacctggtggtttcgacgggtactaacagcgaggtg
tttgccaacatgcgcctgaagttcgggacttcagggagtttctttgaagtggagcgtttg
tctcgtgatgacgggagacagatcgtagagtcgtacctgagagcttgtcagcgaactctg
acacctgagcaaagcgtcgccgtgctgaacagcttcgagccgaccggctgtcctctgcac
ctcaaactgatcctgtctgtagccagacgctggacgtccttcaccccgctcacaggccta
cgcctgggcgccaacttgcatgaaatgatgtcacagctcttacttatgctggaggacaaa
catgggaaggagctggtgggcggagccttaacatacatcgctctggcaagggagggtctg
ctggaggcggagctgcgtgatgtcatgtccctggatgatgatgtcatcagtgcagtgtac
agatattccctccctccaaccccctcgctgatccggctgccccccttcctctgggctcga
cttagacgggacctcgaggatcagctggaggaacgctggacgggtggagtcgccaccatc
ggcttcaacagccggcgtctgtgcgaggcagtctcagctcggtatctgacatcagagcag
cgggggcggagcctcaggatcctggcggagtacttcctgggtcgatggtcggggaaactg
aagccggcggctctgccgggcctgtcgctgctcctctctgacagaaaggtcccgccccag
ccgctgtggtttgctccaggattggctaacgtcaggaagctccaggagctgccgcatcac
ctgctgcatgctggtctgtgggacgagctgcgacaggaagtcatcggcagcgctgagtgg
ctgtactgtaagagccgggtctgcggggtgtccactgtgatccaggacctggaccagtgc
tcccagtacatggactgcactgagaccaggctggtccgagatgctctggtcctgatgaaa
cccagtctggacttcctggacggtcacatggacatgtcgctgttttacaccgagctgttg
gccagactctgctccttggccacgcccttcccctccatgattggtcagctgtgtagccag
tgcgaggagtggttactgacgtgtccggagccgatcctcctccctaagtgcagcttcctg
cagcagccagggggggcgctgcagcgcacactgaccggactgacgggaggtgtcctctgt
atggacgtcagtgtggaggcggagcttctgctggcaggttctgatgacggcgtggtggcg
gtgtggagcctcgctgaccagcagctcatccactgcctgctgggacacaccggggcagtt
ttgtctgtcaaagtgattgacagctcctcccactgtctctcattggctgccgacggctct
ctgaggaggtggagcctgatggacggccaacagcttctctgtatccaggaggcggtgcct
attgactccgccccttcctcagtgcacctccacctgtgtgagcagaatcaggtgctgttt
gttcacagctgcacacaggtgaaggtgttgaagctggatggctctgagctcctcagcagc
agcagcagcagtgatgatggaggctcggtggttctgggagttctgggagattcagtgttt
tctctgtgtggttctggtcgggtcagaatctgtcatcctgtcagcgggactcaaactgtg
gagacgcagctggagaactgtcagggaggtctcactgtggtcaagtctgccacgttacca
aaacacgggaaagtgttcatcgtttctgcagacggagttctccatcaggtctccaggtcc
ggcagacagacggctgctgagtttcctctggttccgtctttactttcagtcactgaagat
gaaaaaatcctgatagcaggcagcgatcggactctgagcctcttcaacgtggaccaagac
tcggtggacagattcctggacctccagcacgaggacagcgttctgtccgcctgcgtctcc
tcagactgccggctgctcgtctccggagctgctgaccagctcatacggatctggtctgtg
accaccggagctctgttggactccctgtgtggttcagattctcccgtcacttctctggct
ctttataacaacttggtgatttctgcctcggctgctgctgccggcgtccatctgtggagt
ctgaagtacgacacccgacacaaaccggtcgcccacatccctgcaggctgcgcccacgtc
gccatcactaaagacacggatcgagttttctacgtccgacagcagagtcagacggaggtg
atcagctggaacaacctcacaggatctctatcagagcgcttggcggtctctgctcaggtt
tgctgtctggagttggctcagaacaaacggctgctgctctgcggtctgaccaccgggacc
gtcctcatctacccgctggcgctgcctcaggagacgctctgcatcccccctccagagagc
ctctccagggtgctctgcctggccgtcagcccccaggagaagcacgtggcggtggcctac
gaggactcagtgcgtttgttcgagatcaccaccagagacagcttccccacggtggaggga
ccgctgaagggcttccccctgtccctgctccacggcccgccgtcctccatggcgctgttg
tccaaccgctggctgctgtacgggacgagctgcggcgaggtgaagctccacgacttcagc
agcggcagcagctctgatctggagcctcaccgcagcagagtcacctgtgtgacgggcagt
acctgggggacccacgctctggtgggctccgaggatgccgttcagaggctgtgggccctc
aacccgctggtactggaccacaccatggagtacaagggtttcttctttgagggcgtcctc
tcggctgcgttctctgacagcgaccagttcgtcttcacaggatctcaggacagaaccgtc
aaagtgtgggacgtctcctcaggaaagctgctgtacgttcagtacgtctacgccccggtc
gtcaggatggtgaccttcaggaacggcttcgtggcgctgtctcagcagggcgccgtcatc
aaggaggtgtttcgctgtccggaccacgtcagtccggactacaaccctctgaggaacgtc
aaggcccagtaccgggtcacctccagggagaagactcgagacgaccagcagagcaccgcg
tccgacctgaaggacttcaacccggcccagttcaacctgaacctcatgggcatgctcaga
tccaaaccctcctcttcctccacctgccttatactgtag
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