Acanthopagrus latus (yellowfin seabream): 119029332
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Entry
119029332 CDS
T08233
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03410
Base excision repair
alat03420
Nucleotide excision repair
alat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119029332 (rfc4)
03410 Base excision repair
119029332 (rfc4)
03420 Nucleotide excision repair
119029332 (rfc4)
03430 Mismatch repair
119029332 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alat03032
]
119029332 (rfc4)
03036 Chromosome and associated proteins [BR:
alat03036
]
119029332 (rfc4)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119029332 (rfc4)
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119029332 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
119029332 (rfc4)
Chromosome and associated proteins [BR:
alat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119029332 (rfc4)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119029332 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
119029332 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_30
AAA_22
AAA_16
AAA_11
AAA_24
Gp44_lid
Mg_chelatase
AAA_28
DUF815
SLFN-g3_helicase
KH_DUF2096_C
AAA_19
RuvB_N
AAA_14
AAA_5
ResIII
DUF3802
Cdc6_lid
DNAX_ATPase_lid
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
119029332
NCBI-ProteinID:
XP_036972001
LinkDB
All DBs
Position
11:complement(2168079..2175505)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGGTVQSTRPQKDKAAGGPSTEKKAKAVPWVEKYRPKCVDDVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRKDGKACPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANEIQEERLLDICEKENLKYTKESIAALVKVSDGDLRKAITFL
QSAARLSVNKEITESAVIEIAGVVPDKMIDNLLQICFKGTFEKLEVAVRNMVDEGYAATQ
ILSQLHESIIEQDLTDKQKSAITEKMAVVGKCLSDGADEYLQMLSLCSVIMQEASQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggtggaactgttcagtctactagacctcagaaagacaaggca
gcaggaggacccagtacagagaagaaagccaaggctgtcccttgggtagagaaatacagg
ccgaagtgtgttgatgatgtggcctttcaggaggaggtggtggcagtgctgaagaagtct
ctggaaggagcagatcttcccaacttgctgttttacggccctcctggaacaggaaagacg
tccaccatcttagctgctgccagagagctttatggtccagagctgtacagacagagggtg
ctggagctcaacgcctctgatgaacgtggcatccaggttgtcagagagaaggtcaaaaac
ttcgctcagctcactgtggctgggactcgcaaagatgggaaggcgtgtcctccttttaag
atcatcatcctggatgaggccgactccatgacggcaccagctcaggctgctctcaggcgg
accatggagaaggagtcccgcaccacccgcttctgcctcatctgtaactacatcagcagg
attattgagcctctgacctccagatgttccaagtttcgcttcaaacctctggcaaacgag
atccaagaggagcgcctgctggacatctgtgagaaggagaacctcaagtacaccaaagag
agtatagcagctttggtgaaggtgtctgatggagacttgcggaaagccatcaccttcctc
cagagtgctgcacgcctcagcgtcaacaaggagatcacagagagcgccgtcattgaaata
gccggggtcgtacctgacaagatgattgacaacttgctccagatctgcttcaaaggaaca
tttgagaaactggaggttgcagtcaggaacatggtggacgaaggctatgcggccacgcag
atcctgagtcagctccatgagtctatcatagagcaagacctgactgacaaacagaagtca
gctatcacagagaagatggcggttgtgggtaaatgcctgtcagatggtgcagatgagtac
ctgcagatgttgagtctgtgttcggtcatcatgcaggaggcctcgcagaacaactaa
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integrated database retrieval system
