Acanthopagrus latus (yellowfin seabream): 119029488
Help
Entry
119029488 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119029488
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119029488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
U-box
zf-RING_5
zf-RING_6
ANCHR-like_BBOX
Prok-RING_4
CC_BshC
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
119029488
NCBI-ProteinID:
XP_036972206
LinkDB
All DBs
Position
12:23014776..23017170
Genome browser
AA seq
556 aa
AA seq
DB search
MAQKGVQLDQETFSCSICLDLLKDPVAIPCGHSYCMNCIKDHWDSEDEENIYSCPQCRET
FTPRPVLVKNTMLAVLVEELKKTELQAAPADHCYAGPEDVACDFCTGRKLRATKSCLVCL
VSYCEKHLQPHYESPMFEHHKLVKPTEKLKENICSRHNEVMKMFCRTDQQCICYLCSVEE
HKGHNIVSAAAERTERQRELEGSRHNIQQRIQDREKDVKVLQREVEAINGSADKAVEHSE
KIFTQLIRLMEKRRSDVKQQVRSKQETEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLKYFEDVTAAVSVLRDKLQDVLRDTWTNISLT
VTEVDVLLSQPEPKTRADFLKYSHEITLDPNTANRRLQLSEGNRKVKRKEVKQSYSSHPD
RFTDWAQVLSRESLTERCYWEVRRRRGRVEVAVAFKNIRRAGNSDKCRFGCNNKSWSLDC
DNDSYEFWYNNIDTPVSGPESSRVGVYLDHSAGILSFYSVSDTMTLLHRVQTTFTQPLYA
GLWLDRYTTAEFCKIK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaaaggagttcagctggaccaggagaccttctcttgttcgatctgtctggat
ctactgaaggatccggtggctattccctgtggacacagctactgcatgaactgtattaaa
gatcactgggacagtgaagatgaggagaatatctacagctgccctcagtgtagagagacc
ttcacaccgaggcctgtcctggttaaaaacaccatgttagcagttttagtggaggagctg
aagaagactgaactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgcgatttctgcactgggaggaaactgagagcaactaagtcctgtctggtctgtctg
gtctcttactgtgagaaacacctccagccccattatgaatcacctatgtttgaacaccac
aagctggtgaagcccactgagaagctgaaggagaacatctgctctcgtcataatgaggtg
atgaagatgttctgtcgtactgatcagcagtgtatctgttatctctgctctgtggaagaa
cataaaggccacaacatcgtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacacaacatccagcagagaatccaggacagagagaaagatgtgaaggtg
cttcaacgggaggtggaggccatcaatggctctgctgataaagcagtggagcacagtgag
aagatcttcacccagctgatccgtctcatggagaaaagacgctctgatgtgaagcagcag
gtcagatccaagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctcaagtactttgaggatgtgacagcagctgtgtca
gtgctcagagacaaactacaggacgtcctgagagacacatggaccaacatctcactgaca
gtgactgaagtggatgttttactgtctcaaccagagcccaagaccagagctgacttctta
aaatattcacatgaaatcacactggatccaaacacagcaaatagacgtctgcaattgtct
gagggaaacagaaaagtaaaaagaaaggaagttaaacagtcttattctagtcacccagac
agattcactgactgggctcaggtcctgagtagagagagtctgactgagcgttgttactgg
gaggtgaggaggagaaggggaagagttgaagtagcggtcgcattcaagaatatcagaaga
gcagggaactcagataaatgtagatttgggtgtaataacaaatcctggtcattagattgt
gacaatgacagttatgaattttggtacaacaatatcgacactcccgtctcaggtcctgag
tcctccagagttggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtc
tctgacaccatgactctcctccacagagtccagaccacattcactcagccgctctatgct
ggactttggcttgatcgttataccactgctgagttttgtaaaatcaaatag
DBGET
integrated database retrieval system
