Acanthopagrus latus (yellowfin seabream): 119029572
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Entry
119029572 CDS
T08233
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119029572 (notch1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
cEGF
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
119029572
NCBI-ProteinID:
XP_036972363
LinkDB
All DBs
Position
12:complement(18739475..18762966)
Genome browser
AA seq
2470 aa
AA seq
DB search
MYRFFVILTFLIPAIVISQGLKCSLPTESCLNGGWCEATSNGNGECKCPSDFVGNRCQHP
SPCSPSPCRNGGECRAVSHGNTFDFRCVCRLGFTDRLCLTPTNHACMSSPCRNGGTCDLI
TLTAYRCRCPPGWSGKSCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDVN
ECAQSPSPCLNGGVCVNEVGSYHCRCPQEYTGQHCETPYMPCSPSPCHNGGTCVQKGDTT
YDCSCLPGFTGQHCEHNIDDCPGHGCQNGGVCVDGVNTYNCQCPPHYTGQYCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CSHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHMNTDECASQPCLNNGKCVDKINSFHCECPKGFSGSLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYTGQHCETDVNECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGSMCNINIDECAINPCHNGGTCVDGINSFTCLCPEGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
AGFTGPNCQTNINECASNPCLNQGSCIDDVAGYKCNCLLPYTGDNCEILLAPCSPRPCKN
GGVCKEAEDYQSFSCICPEGWQGQTCEVDINECVKSPCRNGAICHNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCRDGINSFTCTCLPGFRGGRCEQDINECESNPCKNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGSCLDSYGTYKCTCPHGYTGVNCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKQQGVEVAHLCRNSGQCLDAGSTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGAVCTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSTDPLTNEPKCFNNGKCVDRIGGYQCVCPAGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDARSCGSLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQVTPDVPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNRSSAFLRDLSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSADGWPEWASVPANVLGQVKESVTAMVSPRKRRELDPVQVKGSVVY
LEIDNRQCYQQSTECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPPNSELYPMYV
VFLGLAALGFVCLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLKPMKN
SDINLMDDNQNEWDDEDPDCRRFRQFEEQAMLELCDHTDHRKWTQQHLDAADLRIASIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGAN
LHNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVDGMVEELINCHADANATDDSGKSALHWAAAVN
NVEAAVVLLKNGANKDMQDNKEETPLFLAAREGSFETAKILLEHFANREITDHLDQLPRD
IAQERMHHDIVRLLDEYNVVRSPGLHSGPLSTSSLSPPLSSPNDYLSNLKPNLSVKKVRK
LSAGGKGGKDGGKGNRMNKKKSLDGKGNLLDTSAVLSPVDSLESPHGYLSDVASPPMTSP
FQQSPPMSLNHLQGSGDHMGQMSMSFDPNPPRLSHLPVSSPNSQGVGGGRGGQLDWLTRM
HPGVGQQGSFSQAPPISHNMMGTLHGVSTATLSQIMGYQNLQTSHLGSSTHMMQQAHSRQ
LQHQNSNSTTAGQTLNQSFPNMELNGSDMQQNNGSGRSVPIHTVMPQETQILGNQFLTPP
SQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSIHS
QMNLIPEQFK
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgatactaacgtttctgattcctgcgatcgtcatctcacaaggt
ctaaaatgctccctgcccactgaatcatgcctgaacggaggatggtgtgaagccacctcc
aatggaaatggagaatgcaagtgtcccagtgacttcgtaggcaaccgctgccagcatcca
agcccctgcagcccttcaccctgccggaatggtggcgaatgccgagcagtctcccatggc
aacacatttgatttccgctgcgtgtgccgcctgggtttcaccgaccgtctatgcctgacc
cccaccaaccatgcctgcatgagctccccatgtcgcaacggaggaacgtgtgatctcatt
accctcactgcctaccgttgccggtgcccacctgggtggtcaggtaaatcatgccagctc
gccaacccatgcgcttccaacccatgtgcaaatggcggccagtgctctgccttcgattcc
acctacatctgcacctgcccacccgccttccacggtcaaacctgcaagcaagacgtcaac
gagtgcgcccagtctccctctccctgtctgaacggcggggtgtgtgtgaacgaggtgggc
tcgtaccactgtcgctgtcctcaggagtacaccggccaacactgcgagaccccctacatg
ccatgcagcccctcgccgtgccacaacggaggcacatgtgtccagaagggggacaccacc
tatgactgcagctgcctgccaggcttcacaggtcagcactgtgagcacaacatcgacgac
tgcccaggtcacggctgccagaatggtggcgtgtgtgtggatggtgtgaacacctacaac
tgccaatgcccaccacattacacaggtcaatactgcacagaaaacgtggatgagtgcgag
ttgatgcccaacgcatgccagaacggaggaacttgccatgacactcatggcagctaccac
tgcgtctgcgtcaacgggtggacgggcgacgactgcagcgagaacattgacgactgtgcc
agtgcagcttgttaccacggtgccacctgccatgaccgcgtggcatctttcttctgcgag
tgttctcatgggcgcacaggtttgctgtgccaccttgatgacgcctgcatcagcaaccca
tgtcagaagggttccaactgtgataccaacccagtcaatggcaaggcaatctgcacatgt
cctccaggttacactgggtcagcctgcaacctggacattgacgagtgctccctcggtgcc
aacccttgtgaacacggcggccgctgcctcaacaccaaaggctccttccagtgcaagtgt
cttcaaggatatgaaggccctcgttgcgagatggacgtcaatgaatgcatgtctaatcct
tgccataacgatgccacttgcttggaccagatcggagggttccactgcatctgtatgcca
ggatacgagggtgtgttctgccacatgaacacagatgagtgtgccagccagccttgtctc
aacaatggcaagtgtgtcgacaagatcaactccttccactgcgagtgcccaaaaggtttt
tcagggagtctgtgtcaggtggacattgacgagtgtgccagcacaccctgcaagaatgga
gccaaatgtaccgatggccccaacaagtacacctgcgaatgtgctgaaggttacacaggg
cagcactgtgagaccgacgtcaacgagtgctactccgacccctgccactatggcacctgt
aaggatggcctggcctccttcacctgctattgccgccccggctacaccggccgcctgtgt
gagaccaacatcaacgagtgtctcagccagccttgcaagaatggtggcacttgtcaggac
agggagaacacttatatttgtgcctgccccaaaggcacagcaggtttcaactgtgaggtc
aacctggacgactgtaagagcaaaccctgcgactacgggaggtgcatcgacaaaatcaat
ggctacgaatgtgcatgcgagcccggctacacaggatcaatgtgtaacatcaacatcgat
gaatgtgccatcaacccctgtcacaatggtggtacctgtgttgatggcatcaacagcttc
acctgcctgtgtccagagggctacaacgacgccacctgtttgtctcaagtggatgagtgt
ggcagcaacccctgtatccatggcagatgccaggacctcatcaatggctataaatgtacc
tgcgactctggctggagtggcccaaactgtgacatcaacaacaacgagtgtgagtccaac
ccatgcatgaatgggggaacctgcaaggacatgaccagcgggtaccactgcacatgcaga
gcaggcttcactggacctaactgccaaactaacatcaacgagtgtgcctccaacccctgc
ctcaaccagggctcctgcattgacgatgtggctggatacaagtgcaactgtttgctgccc
tatactggtgacaactgtgagatcttgctggcaccctgcagccccagaccctgtaaaaac
ggtggagtatgtaaggaggctgaagactaccagagcttctcctgcatctgccctgaaggg
tggcaaggtcaaacttgtgaggttgacatcaacgaatgcgtgaagagcccttgccgcaat
ggtgctatttgccataacactatgggtggctaccagtgcaagtgccagccaggttacact
ggccagaagtgtgagacagacactgacgactgcaaaccaaatccctgcagtaatggtggg
ctgtgccgcgatggcatcaacagcttcacatgcacctgtctacctgggtttcgcggtggc
agatgcgagcaagacataaacgagtgtgagagtaacccctgcaagaacggtgccaactgc
accgattgtgtcaacagctacacctgcacctgcccgcctggcttcagtggcatcaactgt
gagatcaacaccaacgactgcacagacagctcttgctttaatggtggcacctgcgtcgat
ggaatcaatgctttcacctgcctctgtctacctggattcactggaagctactgccagtat
gatatcaatgagtgtgactccaaaccttgcctcaatgggggatcttgtcttgacagttac
gggacatacaagtgcacctgtcctcacggctacacaggagtcaactgtcagaatcttgtg
cgctggtgtgattcatccccttgtaaaaatggagggtcctgctggcagcagggagcctct
tacacctgccagtgccagactggatggactggtctctattgtgacatccccagtgtctcc
tgtgaggtcgcagccaagcagcaaggggtggaggttgctcacctgtgcaggaactcaggc
caatgtctggatgctggaagcacacattactgccgctgtcaggccggctacacagggagt
tactgccaggaacaagtggacgagtgctcacctaatccctgccagaatggagccgtttgt
actgattatctgggaggctacagttgtgagtgtgtccccgggtaccacggtgtaaactgc
tccaaagagatcaatgaatgtcagtcacagccctgtcagaatggaggcacctgcatcgac
ctcatcaacacgtacaagtgctcctgtcccagaggaacacaaggtgtccactgtgagatt
aacctggacgactgcactccttccaccgaccccctgaccaacgagcccaagtgcttcaac
aacggcaagtgcgtggaccgcatcggaggttatcaatgtgtgtgtccggcaggctacgta
ggcgagcgctgcgaaggtgacgtcaacgagtgtttgtccgacccatgtgacccgagaggc
tcctacaactgcattcagctcaccaacagctaccgctgcgagtgccgcaccggatacaca
ggtcagcgttgtgacaaggtgtttgacggttgtaaaggaagaccctgcaggaatggagga
acatgtgctgtagccagtaacacgcctcatggtttcatctgtaaatgtcctcctggcttc
accggctcctcctgcgagtatgacgctcgctcctgtggaagtctaaactgcaggaatgga
ggcacatgtgtctcaggccacctgggcccacgctgcctctgtccaccaaccttcactgga
cctgagtgccagacccccaccgacagcctctgcatctccaacccctgctataacggcggc
acctgccaggtcaccccagacgtgcctttcttccagtgcagttgcccaagcaatttcaac
ggcctgctgtgccacatcctggattattcctttgtaggaggcttcggccgagacatcacc
cctcctccggaagtagaggtgagctgcgagattcctcagtgtgacgagtgggcggggaac
cacatctgtgactcgttgtgcaacaaccacgcctgtggctgggacggaggagactgctcg
cttaattttgatgacccttggcaaaactgctctgcagccttgcagtgctggcgctacttc
aacgatgggaagtgtgacggccagtgcaacagtcctgggtgtctctatgatggctttgat
tgtcagggacaggaaggacagtgcaacccgctgtatgaccagtactgtaaagaccactat
gctgacggccactgtgaccagggctgcaacaatgcagagtgtgaatgggacggcctggac
tgtgccaacaacatgccagagaagctggcagacgggcacttagtccttgtggtccacatc
cccccagagcagcttaaaaaccgttcctcagccttccttcgagacctcagcagcgttctc
cacaccaatgtggtgttccgccgcgatgccaaaggggaaccgatgattttcccatactac
ggcaacgaacaggacctggttaaacacaacgtgctgaagcgctccgcagatggttggccc
gagtgggcttcagtgccggctaatgttttgggtcaagtgaaggaaagtgtgacagccatg
gtcagccctcgaaaacgcagagagctggatcctgtgcaagtcaaaggatctgtggtgtac
ctggagattgacaaccgccagtgttaccagcagtcaactgaatgcttccagagtgccacc
gatgtagctgcattcctcggagcgctggcctccagtgggaatctcaatgttccctatatc
gaagctgtcaccagtgtgagacctactcccccaaactcagagctctaccccatgtacgtt
gtcttcctgggcctggctgctctgggttttgtctgccttggcgttctggtctctcgcaag
aggcgacgagagcacggccagctctggtttcctgagggattcaaagtgtcggagccaagc
aagaagaagcgcagagagccgttgggagaggattctgtaggattgaagcctatgaaaaac
tctgacataaatcttatggatgacaatcagaatgaatgggatgatgaagatccagattgc
aggcgcttcaggcagttcgaggagcaggccatgttggagttgtgtgatcataccgaccac
aggaagtggacacagcagcatctggacgcagctgacctacgtatagcgtcgattgctcct
acgcctcctcagggagagattgagaacgactgcatggatgtcaatgtcaggggacctgat
ggtttcactcccctgatgatcgcttcctgcagtggcggaggacttgagaccggtaacagt
gaagaggaagaagatccctctgcagaaatcatctctgacttcatttaccagggcgccaac
ctccacaaccagactgaccgtacaggcgagactgcgctccatctggctgctcggtacgcc
cgatctgatgccgccaaacgcctcctggaatccagcgccgacgccaacgtgcaggacaac
atgggccgcactcctcttcacgctgctgtggccgcagatgcacagggagttttccagatt
ttaatccgcaaccgtgccactgatcttgacgcccgcatgcatgatggaacaacacctctg
atcctggcagcccgattggctgttgatggcatggtggaggagcttatcaactgccacgcc
gatgctaatgccaccgatgattctggtaaatctgctcttcactgggccgcggctgtaaac
aacgtggaggctgctgtggtgctactgaagaatggtgccaacaaggacatgcaagacaac
aaggaggagacaccgctcttccttgcagcccgtgaaggcagtttcgagaccgccaaaatt
cttctggagcactttgcaaaccgggagatcactgaccacctcgaccagctgcccagagat
atcgcccaggagcgcatgcaccatgacatcgtccgccttctggatgagtacaacgtggtc
aggagccccgggctccatagtggtcccctgagcacctccagcctatcccctcctctctcc
tcccccaatgactaccttagcaacctgaagcccaacctgtctgtcaagaaggttcgcaaa
cttagtgccggaggaaaaggagggaaggatgggggcaaaggtaataggatgaacaagaag
aagtcactggatggtaagggtaacttgctcgacacgtcagctgtcctctctccagttgat
tccctcgagtcgccacatggttatctgtctgatgtggcctctcctcccatgacatcaccc
ttccagcagtccccacccatgtctctaaatcatctacaaggcagtggagaccatatgggg
cagatgagcatgtcttttgaccctaaccctccccgtctctcccacctgccggtgtccagc
cccaacagtcagggtgtaggtggaggcagaggaggtcagttagactggctcaccaggatg
cacccaggcgtaggccagcaaggaagcttcagccaggcgccacccatttcccacaatatg
atgggtactctgcatggcgtcagtactgccaccctgtctcagatcatgggctaccagaac
ctgcagaccagccacctcggctcgtccacgcacatgatgcagcaggctcactcgcggcag
ctccagcaccagaactcaaactccaccacggctgggcagacccttaaccagagtttccca
aacatggaactgaacggctccgacatgcagcaaaacaacggctcaggccgctctgtgcca
atccacaccgtaatgccacaggagacacagatcctcggcaaccagttcctcacccctccc
tcccaacatagctattctggccccatggacaacacacccaaccaccagctacaggtgccc
gaccacccgtttctaactccctcccccggctcccccgaccagtggtctagctcgtcgccg
cattccaacatgtccgattggtcggaaggcatctccagcccgcctacaagtatccattcg
cagatgaatctgatcccagaacagtttaagtag
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integrated database retrieval system
