Acanthopagrus latus (yellowfin seabream): 119029795
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Entry
119029795 CDS
T08233
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alat03009
]
119029795 (ddx55)
Enzymes [BR:
alat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119029795 (ddx55)
Ribosome biogenesis [BR:
alat03009
]
Eukaryotic type
Pre-60S particles
Helicases
119029795 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
Cas3-like_C_2
Helicase_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
119029795
NCBI-ProteinID:
XP_036972825
LinkDB
All DBs
Position
12:24139511..24145091
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AA seq
597 aa
AA seq
DB search
MDNTTDGTWDSLPVRLNERILETLAELKFTHTTPVQAACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISEVMETFIQKFPQFTQILLIGG
SNPIEDVEKFKDKGANIVIATPGRLEDMFRRKSDGLDLACYVKSLDVLVLDEADRLLDMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATAVQKTPS
RLSNYYTICRAEDKFNSLVAFLRQHKHEKNLVFFSTCACVEYYGRALEILVKKVPVHCIH
GKMKHKRNKIFADFRALKSGILVCTDVMARGIDIPDVNWVLQYDPPSSASAFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQLMPPVSDVVDVLPKVQAMSLADRAMFDR
SMRAFVSYVQAYAKHECSLIFRVKDLDFATLARGFALLRLPKMPELRGKTFPDFIETTVD
TDTIRYKDKNREKQRQKMLAEPREETPFPRKNFIKNESWSKQKTKKVRRRKMAAKRKHNE
GSDVDEEDMKELLNDTRLLKKLKKGQISEEDFEKQITSEPKSKHKTGLSHDGSEDDA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacgaccgacggcacgtgggacagtttacctgtcagactcaacgagaggatt
ttagaaacgctcgcggagctgaaattcactcacacgacacctgtacaggcggcttgtatt
ccgctgttcatgagcaacaaagatgttgcagccgaggcggtaactgggagcggaaagacg
ctcgcttttgtcattcccatcatagaactgctgctgaagagggaagagaagctgaagaag
atgcaggtcggcgctctggtcatcactcccacacgagagctggcgcttcagatcagtgaa
gtcatggagacgttcatccagaagttcccacagtttacgcagattctactgatcggtggc
agtaacccgatagaagacgtggagaagttcaaggataaaggagcgaacattgtgatcgcg
actccgggccgcctggaggacatgttcaggaggaagtccgatggtctggacttggcctgt
tatgtaaagagtctggacgtgctggttctcgatgaggccgacagacttctcgacatgggg
ttcgaagccagtctgaacaccatcctgggctacctgcccaaacagagacgaacaggcctg
ttttcagccacgcagacgcaggagctggagaagctggtgagagccggcctcaggaaccca
gtccgcatcaccgtgaaagagaagggcgtcgctgccaccgccgtccagaaaacaccttcc
agactctccaactactacacaatctgcagagcagaagacaagttcaacagcctcgtggcg
tttttgaggcaacacaagcatgagaagaacctggtcttcttcagcacgtgtgcctgtgtg
gagtactacggtcgagcgctggagattctggtgaagaaggttccggtccactgcatccac
ggcaagatgaaacataaacgcaacaagatctttgcagactttcgggccctgaaaagcggg
atcttggtgtgtacagatgtcatggccagaggtatcgacatccccgatgttaactgggtg
ctgcagtacgatcctcccagcagcgccagtgcgtttgtacatcgatgtggacgtaccgct
cgaatcggcaaccagggcaacgccctcgtcttcctgctgcccatggaggagtcctacgtc
aactttctgtccatcaaccagaaatgcccgctccagctgatgcctcctgtcagtgatgtt
gtggacgtgctgcccaaagtgcaggccatgtctctggctgaccgcgccatgtttgacagg
agcatgagggccttcgtctcgtacgtgcaggcctacgccaaacacgaatgtagcctcatc
ttcagagtcaaagatctggattttgccacgctagcacgcggcttcgccctcctccgcctg
ccgaagatgcccgagctgagggggaaaacgtttcccgatttcatcgagacgaccgtggac
acggacaccatccgctacaaggacaagaacagggagaaacagaggcagaagatgctcgca
gagcccagagaagagacgccttttcccagaaagaacttcatcaagaatgagtcctggtcg
aaacagaagaccaagaaggttcgcaggagaaagatggctgccaagaggaagcacaacgag
ggttcagacgtggatgaagaagacatgaaggagcttttaaatgacactcgccttctcaag
aaactaaagaaagggcaaatcagcgaggaggacttcgagaaacagataacgagcgagccg
aagtcgaaacacaaaacaggactgtcacacgacggctcggaggacgacgcatga
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