Acanthopagrus latus (yellowfin seabream): 119030008
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Entry
119030008 CDS
T08233
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119030008 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119030008 (exosc2)
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119030008 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119030008 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
119030008
NCBI-ProteinID:
XP_036973197
LinkDB
All DBs
Position
12:14940051..14943397
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AA seq
293 aa
AA seq
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MAADMRLPTIRKAVSLLDSASDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEHLEEEAGGFYTSLEPVSLADREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacatgagattaccaactatccgaaaagcagtttctttattggattctgct
tccgaccgaaaggatctggtggtccccggcgatgttatcacttcagacaccggtttcatg
aggggtcacggtacctatgtcgacgaggacaagctgacagcatcagtcgccggagaggtg
cagagagtagacaagctgatctgtgtcagaccacttaagaccaggttcaacggtgaggtt
ggagacgtggtggttggcagaatcacagaggtgcaacagaaacggtggaaagtggagaca
aactctcggttggactccgtcctcttgttgtcttctgtcaatctgcccggaggagagctg
aggagacgatcagcagaagatgagctgaccatgagagagtaccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtcttctcagatggagcgctatcacttcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgctggttcagctttctccttctttgatcaag
aggcagaaaacacatttccacaacctgccgtgtggtgcatcaataatccttgggaataac
ggctttgtgtggttgtatcctacaccagaacacctggaagaggaggctgggggcttctac
accagcctggagcccgtcagtctggcagatcgagaggtgatttcacggttgagaaactgc
ctgctggctttggctgcacacaaggtccttttgtacgacaccagtgttctctattgctac
gaatcgtcagttcagcaccaggtaaaggacatcttgaaaccagaagtaatggaggagata
gtaatgttgacgcaacagaagctgttggaacaggaaggttaa
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