Acanthopagrus latus (yellowfin seabream): 119030038
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Entry
119030038 CDS
T08233
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119030038
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119030038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-RING_10
U-box
ANCHR-like_BBOX
zf-RING_6
Gp58
PRP1_N
zf-H2C2_2
CC_BshC
Motif
Other DBs
NCBI-GeneID:
119030038
NCBI-ProteinID:
XP_036973250
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Position
12:complement(25038928..25041082)
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AA seq
558 aa
AA seq
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MAQKAVHLDRETFSCLICLDLLKDPVTTPCGHSYCKNCINDHWDTEHEKRIYSCPQCRKS
FIPRPELLKNTMLAALVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLRAVKSCLVCL
ASYCEKHLQPHYDVAPLKKHKLVEPSEKLQENICSHHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRHNIQQRIQDREEDVKLLQQEVEAINGSADKAVEHSE
KIFTQLIRLMEERRSDVKQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELKKLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLKYFEDVTAAVSELRDKLQDVLRDTWTNISLT
VTQVDVLLSLPENMTRADFLRYSCEITLDPNTANTYLLLSEGNRKATYTRQQQSYFDHPD
RFTRCPQVLSRESLTGRRYWEVEWRERGVDVAVAYKNISRAGDLYECGFGYNDKSWSLYC
KTNNYEFWYNKVQTPVSGPLSSRVGVYLDHSAGILSFYSISDTMTLLHRVQTTFTQPLCA
GLRFGWFSGDSAEFCELS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaagcagttcatctggatcgagagactttctcttgtctgatctgtttggat
ctactgaaggatccggtgacgactccctgtggacacagctactgcaagaactgtattaat
gatcactgggacacagagcatgagaagaggatctacagctgccctcagtgcaggaagagc
ttcataccgaggcctgagctgctgaaaaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgagagcagttaagtcctgtctggtctgtctg
gcctcttactgtgagaaacacctccagcctcattatgatgtggctccattaaagaaacac
aagctggtggagccgtcagagaagctccaggagaacatctgctctcatcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgacacaacatccagcagagaatccaggacagagaggaagatgtgaagctg
cttcagcaggaggtggaggccatcaatggctctgctgataaagcagtggagcacagtgag
aagatcttcacccagctgatccgtctcatggaggaaagacgctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaacatccgtcctctcaagtactttgaggatgtgacagcagctgtgtca
gagctcagagacaaactacaggacgtcctgagagacacatggaccaacatctcactgaca
gtgactcaagtggatgttttactgtcactaccagagaacatgaccagagctgacttctta
agatattcatgtgaaatcacactggatccaaacacagcaaacacatatctgttattatct
gaggggaacagaaaagcaacatacacaagacaacaacagtcctattttgatcacccagat
agattcactcggtgtcctcaggtcctgagcagagagagtctgactggacgtcgttactgg
gaggtggagtggagagagagaggagttgatgtagctgttgcatacaagaatatcagcaga
gcaggggacttatatgaatgtggatttggatacaatgacaaatcttggtcgttatattgt
aaaaccaataattatgagttttggtacaacaaagtccaaactcccgtctcaggtcctctg
tcctccagagttggagtgtacctggatcacagtgcaggtattctgtccttctacagcatc
tctgacaccatgactctcctccacagagtccagaccacattcactcagccgctctgtgct
ggacttcggtttggctggttttctggagactctgctgagttttgtgaactcagttag
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