Acanthopagrus latus (yellowfin seabream): 119030081
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Entry
119030081 CDS
T08233
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
alat01100
Metabolic pathways
Module
alat_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
119030081 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
alat01003
]
119030081 (csgalnact1a)
Enzymes [BR:
alat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
119030081 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
119030081 (csgalnact1a)
Glycosyltransferases [BR:
alat01003
]
Glycan extension
O-Glycan
119030081 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Motif
Other DBs
NCBI-GeneID:
119030081
NCBI-ProteinID:
XP_036973325
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Position
12:complement(19328211..19362824)
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AA seq
581 aa
AA seq
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MLHAAMLRRGMLAWVSRVGVVLVLLCCSLSLLYVMTCSPSLALPRAGPIHPSLGGTGPGI
GAGAGGTGGARAPAQSGRPPGVQSYQVLLQEREEQHRLHISSLKKEIAQLKEALQERSQQ
LKGVQESLKRAAGGPAEGQDTGAGSQGGGLGEAQGARTDLQEFLRSQLSKAEVSAGTRLP
SEYAVLPFESFTLQRVYQLEMGLTRHPEEKPVRKDKREELGEVLETALHSLNMPSSQQDS
RSAAEKTSKVYSPSDFVEGITRTEKDKGTLYELTFRGESSKEFRRLVLFRPFGPLMKVKN
ERVDTVNVPINIIVPLSRRTDKFKQFMHNFREVCVRQDGRVHLTVVYFGKEQMSEVRSTL
ENTSREVNFKNYTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRL
NTQPGKKVFYPVLFSQYNPTLIYGSPEHVPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDF
INIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKHCADELPPDQYRMC
MQSKAMNEASHGQLGMLFFRHEIEAHLRKQKLQQNSNPKKA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgctacatgcagcgatgctgcggcgtggaatgctagcctgggtctcccgtgttggagtc
gtgctggtgcttctctgctgctccctgtcactcctctatgtgatgacctgcagtccaagt
cttgctctgccccgtgcgggacccatccaccccagcctggggggcacagggccggggatt
ggagctggagcaggagggacaggaggagcccgagcccctgctcaaagtggtagaccccct
ggtgttcagtcttatcaggtgctcctacaagagcgtgaggagcagcatcgcctccacatc
tcctccttaaagaaggagattgctcagctcaaggaggctttgcaggagcgtagccagcag
ctgaaaggagtgcaggagagtctgaagagagccgccgggggcccagcagagggacaggac
actggggctggttcgcagggtggaggtctcggtgaagctcagggagctaggacagacctc
caggagttcctgcggagccagctgtcgaaggccgaggtgagtgctggcacccggctgccc
agcgagtacgcagtgttgccctttgagagtttcaccctgcagagggtgtaccagctggag
atggggctgacgcgacaccccgaggagaagcctgtaaggaaggacaagagagaggagctg
ggtgaggtgctggagacggccctgcacagcctcaacatgccatcatcccaacaagatagc
aggagtgcagctgaaaagacgagcaaagtatactcaccatctgactttgtagaaggtatc
acccgtacagagaaggacaaagggacgctgtatgagctgaccttcagaggggagtcgagt
aaggaattcaggcgtctcgtcctcttccgtccatttgggccgctgatgaaggtgaaaaac
gagagggtggacacagtcaacgtcccaatcaacatcatcgtcccactgtccagacgcacg
gacaagttcaaacagttcatgcacaacttcagggaagtgtgtgtgcggcaggacggccgg
gtccatctgaccgtggtgtatttcgggaaggagcagatgagcgaggtccgcagcactctg
gagaacacgtccagggaagttaattttaagaactacactctgctgcagctggacgaggag
ttttctcggggacggggtctagacgtcggtgcccgtgcctggaagggaggcaacgtgctg
cttttcttctgcgacgtcgacatctacttcaccgccgacttcctcaacacctgccggcta
aacacacagcccggtaaaaaggtgttctatccggtgttattcagccagtacaaccccact
ctgatctacgggagtcctgaacacgtcccacctgtggagcaacagctggtaatcaagaaa
gacacggggttctggcgggatttcggcttcggcatgacctgccaataccggtccgacttc
ataaacataggaggttttgacatcgacatcaaaggctggggtggcgaagatgtccacctg
tacaggaagtacctccacagcaacctcctcgtggtccgagcaccgtcgcgaggcttgttc
cacctgtggcacgagaaacactgcgccgacgagcttccaccggaccagtaccgcatgtgc
atgcagtccaaggccatgaacgaggcctcgcacggccagctggggatgctgttcttcagg
cacgagatcgaagctcacctccgcaaacagaagctacagcaaaactcaaaccccaagaag
gcataa
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