Acanthopagrus latus (yellowfin seabream): 119030086
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Entry
119030086 CDS
T08233
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alat03019
]
119030086
03041 Spliceosome [BR:
alat03041
]
119030086
Messenger RNA biogenesis [BR:
alat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119030086
Spliceosome [BR:
alat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119030086
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119030086
NCBI-ProteinID:
XP_036973331
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All DBs
Position
12:20328649..20338475
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AA seq
385 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTA
NETSNSKQLSFDEVVNQSSPSNCTVYCGGVTMGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFSSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGGMV
EPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtatgtggggaatctgtccagggatgtgacagag
gccctcatcttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccttactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaattctgggtaaggaagtcaaggtcaactgg
gccacaacgccaaccagccaaaagaaagacacaagcagtcacttccatgtctttgttgga
gatctaagtcctgaaataaccacagatgacataaaagcagcgtttgctccttttgggaaa
atatcggactgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatacagcagatgggaggacagtgg
ctgggagggaggcagattcggaccaactgggccacgaggaagcctgctccgaaaactgca
aatgaaacatccaatagcaagcagctatcttttgatgaggtggtcaaccaatccagtccc
agcaactgcaccgtctactgtgggggagtcacaatgggtctcacagagcaaattatgaga
cagaccttctcaccctttggccaaataatggaaatacgtgttttcccagacaaaggctac
tcatttgtgaggttcagctcccatgaagcagcagctcatgccatcgtatctgtcaatggc
acatccatagagggctatgttgtgaagtgttactggggcaaagaaacaacagacatggtt
agccccatacagcaggtacagatgccacagcagaacacggtgagcttcgcagcgcagccc
tacagtcagtggggtcagtggtacagcaacacgcagcagattggtcagtatgtgcccaat
ggatggcaggtgccgagttatggagtctatggacagacctgggatcagcagggctacaat
catttacatgctggtgctggatggacaggcgtgggcgctgtgagcaacgggggcatggtg
gagcccgggcagggagtcaacgggactgtgctaaccaaccaggctggcatgagcactgct
ggctaccacacccactga
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