Acanthopagrus latus (yellowfin seabream): 119030417
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Entry
119030417 CDS
T08233
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03420
Nucleotide excision repair
alat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119030417 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
119030417 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
alat03051
]
119030417 (rad23b)
03400 DNA repair and recombination proteins [BR:
alat03400
]
119030417 (rad23b)
Proteasome [BR:
alat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
119030417 (rad23b)
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119030417 (rad23b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
Dsc3_N
OTU1_UBXL
Ubiquitin_5
UBA_3
CUE
Hamartin
FYVE_2
Motif
Other DBs
NCBI-GeneID:
119030417
NCBI-ProteinID:
XP_036973874
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Position
12:17360106..17367337
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AA seq
381 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDEEETVKTLKEKIEEEKGKDNFSVSGLKLIYAGKILNDDTALK
EYKINEKNFVVVMVTKAKTASQPSPTSSAPSTTAPAAPTASSSSSETSTERASTDDKPEE
RPSSTAEPATTPVGSEASTNTNLIDEAVSTLVTGQSYDAMVNEMMLMGYEREQVVAALRA
SFNNPDRAVEYLLTGIPGRDATGSDAAASPASGAPAPAAPTSGSSAPANTGSSPSAGGVN
PLSFLRNQPQFQMMRQLIQQNASLLPALLQEIGRENPELLQEISSHQEQFIQMLNEPNPE
PVPAGGGGGAGGAGGAGGQAGDAAGGSHMSYIQVTPQEKEAIERLKALGFPEGLVIQAYF
ACEKNENLAANFLLQQNFDDD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagataactttgaaaaccttacagcagcagacgttcaagatcgacatcgatgaagag
gagacggtgaagacgttaaaggagaagatcgaagaggagaaaggaaaagacaatttctca
gtttctggactgaagttgatctatgctggtaaaatcctcaacgatgacacagccctcaaa
gaatacaaaatcaatgagaagaactttgtggtcgtcatggtgacaaaggctaaaacggcc
tcacagccgtcacccaccagctcagctcccagcactacagcccccgctgcccccaccgcc
tcgtcttccagctcagaaacgagcacagagcgagcctccacagacgacaagccagaggag
agaccgtcttccactgctgagcctgctaccacccctgtcggctctgaggcttcaacgaac
acaaacctaattgatgaggctgtttcaactctagtgacgggccaatcgtacgacgccatg
gtgaatgagatgatgctcatgggctacgagagggagcaggtagtagcagctctgagagcg
agcttcaacaacccagacagagctgtggagtacctgctcacaggtattccaggcagagat
gcaacaggatctgatgcagcggcttctccagcgagcggagctcctgctcctgctgcacca
acaagcggtagtagcgcccccgccaacactggctcttcaccaagtgccggaggagtcaac
ccgttgagtttcctaagaaatcagccccagttccaaatgatgcggcagctgatccagcag
aacgcctccctgcttcctgccttgctgcaggagattggcagggaaaaccccgagctgctg
caggagatcagcagccatcaggagcagttcatccagatgcttaatgaacctaatccagag
ccagtgccagcaggtggaggtggaggagcaggaggagcaggaggagccggagggcaggca
ggtgacgcagccggcgggagtcacatgagctacatccaggtgacgccgcaggaaaaagag
gcaattgagaggctaaaagccttaggatttccagagggactcgttatacaagcctacttt
gcttgtgagaagaacgagaacttggccgccaacttccttttacaacagaacttcgacgat
gattaa
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