Acanthopagrus latus (yellowfin seabream): 119030546
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Entry
119030546 CDS
T08233
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alat03016
]
119030546 (pus1)
Enzymes [BR:
alat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
119030546 (pus1)
Transfer RNA biogenesis [BR:
alat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119030546 (pus1)
Prokaryotic type
119030546 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
119030546
NCBI-ProteinID:
XP_036974143
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All DBs
Position
12:complement(11711309..11714127)
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AA seq
422 aa
AA seq
DB search
MIKTRPLLSALINQILALERNGGFSRFLCRMTEAAGDDGQTAKQLKRANEENEDSAEKVQ
AAKRIKAEGEHAEDEKKYPKKKVVLLMAYSGKGYYGMQRNPSASQFRTIEDDLVAALIKS
GCIPENHGKDMKKASFQRCARTDKGVSAAGQVVSLKVWMIEDIMEKINEHLPPQIRVLGL
KRVTQSFNSKNNCDGRTYSYMLPTMAFAPKDTDPGNIAAFRLEPDTLKQLNHLFSLYKGT
HNFHNFTSQKAPSDPSARRYIMEMSCGEPFICSNIEFAVITVQGQSFMMHQIRKMIGLVI
AVMKGYAKEDVIGRSWGQEKVDVPKAPGLGLVLERVHFDRYNKRFGGDGLHERLEWESEE
EAIQAFKEAHIYPTIVETEREEGSMVSWMATLPSHHFEATAVYTRDNKNQKRDNADEGNV
SD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaacccgaccactgctgagtgccttaatcaaccagatactggcgttagagaga
aacggtggcttttcaaggttcctgtgcaggatgactgaagcagccggagatgatgggcag
acagccaagcagctgaaaagagccaatgaggaaaatgaagactctgctgagaaggttcag
gctgccaaaaggataaaagcagagggggaacacgctgaagatgaaaagaaatatcccaaa
aagaaagtggtcctcctcatggcgtactctggaaagggatactatggcatgcagagaaat
cctagcgcttctcagtttaggaccattgaagatgatctggtcgctgcacttattaaatct
ggttgcattccggaaaaccacggcaaggacatgaagaaggcgtctttccaaagatgtgcc
agaacagataagggtgtgtctgcagctggccaggtggtgtctctaaaggtgtggatgatt
gaagacatcatggagaaaatcaatgagcacctgccaccacagatcagggtgctcggtctt
aaacgggtcacccagagtttcaattccaaaaacaactgtgacggtcgtacatactcctac
atgcttccaacaatggcctttgcccctaaagacactgatcctgggaacatagcagccttt
cgccttgagccagacacacttaagcagctgaaccatctgttttcgctctacaaaggcacc
cacaacttccacaacttcacttctcagaaggctccgagcgaccccagcgcccgccgctac
attatggaaatgtcctgcggggagcctttcatctgcagcaacattgagtttgctgtgata
acggtgcaaggccagagcttcatgatgcaccagatccgcaagatgattggcctggtgatc
gccgtgatgaagggctacgcaaaggaggacgtgatcgggcggagctggggacaggagaag
gtggacgtacccaaagctccaggactgggcctggtcttggaaagggttcacttcgaccgg
tacaacaaacgcttcggaggtgacgggctgcacgaacggctggaatgggagagtgaagag
gaggcgatccaggccttcaaggaggcccacatctaccccaccattgttgagacagagcgt
gaggagggctccatggtcagctggatggccacgcttcctagccatcactttgaagccacg
gctgtttacacacgagacaacaagaatcagaaacgggacaatgcagacgaaggaaatgtc
tccgattag
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