Acanthopagrus latus (yellowfin seabream): 119030706
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Entry
119030706 CDS
T08233
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alat04515
]
119030706
Cell adhesion molecules [BR:
alat04515
]
Cadherins
Protocadherins
119030706
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
119030706
NCBI-ProteinID:
XP_036974390
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Position
13:complement(4898820..4906469)
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AA seq
993 aa
AA seq
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MDARGTKKTLCGRWRAVCRFALFTCFLDAVCGQIRYSIPEELEHGAFVGNIAEDLGLDLD
KLSARRFRIVSGAKRQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIENPLELY
RVEMEILDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDLDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQSPLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDAND
NAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVDS
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNLPEVILTSVST
PVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDREA
VAEFNITLTARDMGSPPLFTRKTILVQVSDVNDNAPHFKQPSYTVYLTENNAPGASICSV
TAQDPDSGQNAYLSYSILDGDIQGMPVSTYVSINSDNGNIYALRSFDHEQLKNFQITVKA
QDAGFPPLSSNVSVTIFILDQNDNPPVIVSPVPQNGTTPSGAVPRSADAGHLVTKISAVD
ADAGQNSRLFYQMLQATDPSLFSVALYTGEIRTIRQLVEKEPTRHRLVILVKDNGQPPLS
ATVSIILSVVDSLPDSQPDLGDLSLSPHHSSNLTLYLIVSLGAISFTFLVAIIVLVAVRR
LKGRASNGESNFPPVSGGCCGGCCSRSESPTTTEVFKKSNLNVRMSSGASGCSESNSGGA
LPQVYCYKMCLTPESSKSDFMFLKPCSPVMSAQQNNSKSTDYLTSGWSALDRIDLTNNRA
ATPNELKYSNKDWTWTKNQRNSAYKRYSSGNMEGTLSRQQKYDASGFSCSVAPQYWTWGN
HMKECKMTLQEGPGLHYSWAPKYTQPQSEPPDYQHNVYIPGTTSDYSTLKLSPRGELDVY
NTFSTFGKKKRFISHYEQSFDGDDGLISNPIFN
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacgggggacgaagaagacactgtgcgggagatggcgtgccgtgtgccgtttt
gcgctgttcacttgtttcctggacgcagtgtgcggacagattcgctactccatccccgag
gagctggagcacggagcttttgtcggcaacattgcggaggacctgggtctggatctagac
aagctctctgcgcgcagattccggatagtctcgggtgccaagaggcagtacgtggaggta
aatttggagaacggagttttgttcgtcaacgagaggattgatcgtgaggagctgtgcgag
cagagtttgtcctgctcttttcacctgcaggtggtcatagagaaccccctggagctgtac
agggtggagatggagatcctggacgtgaacgacaactctcccagcttcccgtggaccgag
ttcaacctggacatatcggagtccgctgcgcccggatcacgcttcccactcgagagcgca
caggacctggacgttgggtccaactcgctccgcacctacttgctgagcgtcaacgagcat
ttccttttggacatccagacgcgcagcgacggcagtaaattcgcagagctggttctgcag
agcccgctggacagagagcagcaaagtgcacatcagatggtcctgacggcggtggacggg
ggcgcgccggagaggtccggcactgcgcaaattgatatcaccgttttggacgcgaacgac
aacgcgcccgtctttgaccagtcgttttacagagtgaggctcgccgagaacgcacccaaa
ggcacagttgtcataaaactcaacgcgtccgatttagatgagggtcccaatgccgacatc
acttattccttcagcggccacgctcccatcaaagtgcgccagcttttcagcgtggactcg
cgcacgggggaaatcaaagtcaagggagtgatagattatgaaaaagccaggatgcatgaa
atatatgtccaggctaaagacaaaggcccctcggccgtagcagttcactgcaaagtgctg
gtgaacgtcctggataagaacgacaacctgccggaggtgatcctgacttcagtgtccaca
cctgtgcaggaggacgcgcctcctggaacggtgatcgccgtcatcagcgtcatggacaaa
gactcaggtgaaaatgggaacgtggactgcgagatcccgcaccacgtcccgtttcagctg
cactcgtccttcaagaactactacacgctggtaacctgtgattttctggacagagaggcg
gtggcggagtttaacatcaccctgaccgcccgagacatgggctccccaccgctgttcacg
agaaaaactattttggttcaagtgtctgatgtgaatgataacgcgcctcacttcaagcag
ccatcctacaccgtgtatctgaccgagaacaacgcgcccggagcctcgatttgctcggtg
accgcacaggatccagactcgggtcagaacgcgtacctgtcctactccatactggacgga
gacatacaggggatgcccgtgtccacgtacgtgtccataaactcagacaacgggaacatt
tacgcgctgagatccttcgatcatgagcagcttaaaaactttcagatcacagtgaaagct
caagatgccggctttccgcctctgagcagcaacgtgtcagtgactatcttcatactggac
cagaacgacaatccacctgtgatcgtgtcgccggttccgcagaatggaacgacgcccagc
ggggcagtgcccagatccgcggacgccggtcaccttgtcaccaaaatcagcgctgtggac
gcagacgcgggtcaaaactcgcgtctcttctatcaaatgctgcaagcgacggacccgagc
ttgttcagcgtggctctgtacacgggcgaaatcaggacaatacgccagttggtggagaag
gagcccaccaggcacagactggtcatcctcgtgaaggacaatggtcagccgcccctctcg
gccacagtttccatcatcctgtcagtggttgacagcctgccagattcgcagcccgatttg
ggtgacctgtcactaagcccgcatcacagctctaacctcaccctgtacttaatcgtgtcc
ctgggcgcaatctccttcacgttcctggtggctatcatcgtcctggttgcagtgcgcaga
ctgaagggcagagcgtccaacggagagtccaacttcccccccgtgagcggcggctgctgc
ggcggctgctgctctcgctcggagtcgcccaccaccacagaggtgttcaagaagtccaac
ctgaacgtccggatgtcctcgggcgcgtcgggctgctcggagtcgaacagcggcggcgcg
ctgcctcaggtgtactgctacaaaatgtgcctgacaccggagtcctccaaaagcgacttc
atgttcctgaagccgtgcagcccggtgatgtccgcccagcagaataactccaagagcaca
gattacctgacgtccggctggagcgcactggaccggatcgacctgaccaacaacagagcg
gcgaccccgaacgagcttaagtattcgaacaaggactggacctggacaaagaaccaacgc
aactcagcatacaagaggtatagttcaggaaacatggagggcactctttctcgccagcaa
aaatacgatgccagcgggttttcctgctctgtagctccgcagtactggacctggggaaat
cacatgaaggaatgcaagatgactcttcaggagggtccgggtcttcactactcatgggct
ccgaagtacacccagcctcagtctgagccacctgactaccagcacaacgtatacataccc
ggcaccacgtccgactacagcaccctgaagctgtcacccagaggagagctggatgtgtac
aacacgttctccacttttggaaagaaaaagaggttcatctcgcactacgaacagtctttc
gacggagacgacggtctcataagcaaccccatcttcaactga
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