Acanthopagrus latus (yellowfin seabream): 119030735
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Entry
119030735 CDS
T08233
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat03030
DNA replication
alat03420
Nucleotide excision repair
alat03430
Mismatch repair
alat03440
Homologous recombination
alat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119030735
03420 Nucleotide excision repair
119030735
03430 Mismatch repair
119030735
03440 Homologous recombination
119030735
03460 Fanconi anemia pathway
119030735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alat03000
]
119030735
03032 DNA replication proteins [BR:
alat03032
]
119030735
03400 DNA repair and recombination proteins [BR:
alat03400
]
119030735
Transcription factors [BR:
alat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119030735
DNA replication proteins [BR:
alat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119030735
DNA repair and recombination proteins [BR:
alat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119030735
MMR (mismatch excision repair)
119030735
DSBR (double strand breaks repair)
HR (homologous recombination)
119030735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
119030735
NCBI-ProteinID:
XP_036974452
LinkDB
All DBs
Position
13:complement(3665909..3709076)
Genome browser
AA seq
671 aa
AA seq
DB search
MSVKLSQGAVEALCRGSEVRGCVLQLLNIRQIPSAAGPPRYRLMMSDGQHSWSSFLLATQ
LNHLPENDLLVPNCVCKVKKTVTNTLSDGRTVVIVMDMEILQSADETGGKIGNPTPYNKD
GKMSAQQDTETEVSSSSVPPSPPSAAAPGPSYSNNSRALSPPRGSGRGFVGKSPMKAPPS
KFSPSPMKASPSKFSPSKFSPSPMKGSPSKFSPSKFSPSKFSPSKFSPSKAGSSSPGSST
NVLPIAQLNPYQSKWTIRARVTNKSSIRNWSNSKGEGKLFSFEIVDESGEIRITAFNKEV
DKFYSLVEQGKVYYITKGTLKAANKQYTTVKNDYEMTLHAHSSIVPCDDGQGIPAVHCDF
VPIAELENRDKDAIIDVIGVCKSADDVSRITTKTSREVSKRALNLIDTTGKEVAVTLWGE
EAEKFDGSGQPVVAVKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWFDREGYAAD
SQSLTETRSVGSGARMNWKALSDIKDEQMGHGEKAEYFSCVATVVYTRKENCLYPACPSA
DCNKKVIDQNNGLYRCEKCNREYPNFKYRLLLSANLADFGDNQWVTCFQETAEVLLGQSA
ETLGELRETDEAAFDQVFQKANFTTHIFKNRVKLETYNDESRVKVTVMEVQPVDHRDYSR
RLLSNIRKLAR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaactctctcagggggcagttgaagccctgtgcagaggctcggaggtgaga
ggttgtgtgctgcagctgctgaacatacgtcagatccctagtgctgctggtccacccagg
taccggctcatgatgagcgacggtcagcactcttggtcatccttcctgctggccacacag
ttaaaccacctgccagagaatgacctcctggtacctaattgtgtgtgtaaggtgaagaag
acggtcaccaacacattgtcagatggcaggactgtggtgattgtgatggacatggagata
ctgcagtcggctgatgaaactggagggaagattggaaatcccactccatataataaggac
ggtaagatgtcagcccaacaggatacggaaactgaagtctcaagttcctctgtcccacct
tctcctccatctgctgcagcacctggaccctcctattcgaacaacagcagagccctttct
cctccccgaggcagcggaagaggctttgtgggaaagtcacccatgaaggctccaccctcg
aagttttcaccttcaccaatgaaagcttcaccctcgaagttttcaccctcaaagttttcc
ccctcacctatgaaaggctccccctcaaagttttccccctcgaaattttccccctcgaag
ttttccccctcgaagttttccccctcgaaggccggaagttcttctccaggttcatcaacc
aatgtgcttcccattgctcaactgaatccctaccagagcaagtggactatcagagcccga
gtcaccaacaagtccagcatccgcaactggagtaactctaagggagagggaaagctcttc
tcctttgagatagtggatgagagtggagagatcaggatcaccgccttcaacaaggaagtg
gacaagttttactctctagtggagcaaggcaaggtgtactacatcaccaagggtacgctg
aaggcggccaacaaacagtacaccacagtgaagaacgactacgagatgaccctccacgca
cattcatccattgtgccatgtgatgatggtcagggcatccccgcagtgcactgtgacttt
gtgcccatcgcagagctggagaacagagacaaggacgccataatcgatgtgattggagtg
tgcaagagcgcagatgatgtatcccgtatcaccacgaagaccagcagagaagtctccaag
agggccctcaacctaatagacacaactggcaaagaggtggcagtcacattgtggggggag
gaggcggagaagtttgacgggtctggacagcctgtggtcgccgtcaaaggggctcgcttg
tctgatttcgggggcagatctctctctgctttgttcagttcaacagtcatggtcaaccca
gacataccggaggccttcagactgagggcctggttcgatcgggaaggctacgcggcggac
agccaatccctgacagagacgaggtcggtggggagcggagcgaggatgaactggaaagca
ctgagcgacattaaggatgaacaaatgggacacggagagaaggcggagtatttcagctgc
gtagcgacggtggtgtacactcgaaaggagaactgtctgtacccggcctgtccgtctgca
gactgcaacaagaaagttatagaccagaacaacggactgtaccgctgcgagaagtgtaac
agagagtacccaaacttcaaatacagactcctgctctctgccaacttggcggacttcggg
gataaccagtgggtgacatgcttccaggagacagctgaggtcctgttgggtcaaagtgca
gaaacgttgggagagctgagagaaacagacgaggctgcatttgatcaagtcttccagaaa
gccaacttcaccactcacatctttaaaaacagagtcaaactggagacgtacaatgatgag
agtcgagtgaaggtaaccgtgatggaggtccagccggtggaccacagggactacagcagg
agactcctcagcaacatccgaaaattggccagatga
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