KEGG   Acanthopagrus latus (yellowfin seabream): 119030770
Entry
119030770         CDS       T08233                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Pathway
alat04140  Autophagy - animal
alat04148  Efferocytosis
alat05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:alat00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119030770 (vps11)
   04148 Efferocytosis
    119030770 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119030770 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:alat04131]
    119030770 (vps11)
Membrane trafficking [BR:alat04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    119030770 (vps11)
   Hops complex
    119030770 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C Clathrin Beta-prop_WDR3_1st zf-C3HC4_2 Beta-prop_WDR36-Utp21_1st zf-C3H2C3 zf-rbx1 zf-RING_2 zf-C3HC4 Beta-prop_EML_2 TPR_GEMI5 zf-RING_5 WD40_CDC20-Fz zf-ANAPC11 zf_RING_Vps8_fungal TSGP1 zf-RING-like Beta-prop_HPS5 Rab11-FIP3 Beta-prop_TEP1_2nd CC_Bre1 Kbp-5
Other DBs
NCBI-GeneID: 119030770
NCBI-ProteinID: XP_036974499
LinkDB
Position
13:17832423..17882871
AA seq 940 aa
MTTPCCSCSANANKMAAFLQWRKFVFFDKDTVKDPVDTGKNFALPSGISACDSGRGHIVL
GDMDGRIWLLTRSLQLTSFQAYKLRVTHLYQLKQHSILVSVGQDEHGINPLVKVWNLDKR
DSGNPLCTRIFPAIPGNKPTEVSCLCVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLT
LHEGASPVTGLAFRQVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALCCSSLADP
SQDSQFIVAGDECVYLYQPDERGPCFAFEGHKLLVHWHRGYLFLLIRDAKSPNKTEFGSR
ESFPSDRQILTIYDLDNKFIAYSAAFDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKL
EMLFKKNLFVMAINLAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPS
YVIRKFLDAQRIHNLTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEV
HFDVEIAIKVLRQAGYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQSE
SNMKRYGKTLMHHVPEGTTLLLKGLCTNYLPSRDTAEKECLDRVQINKANSEEFIPIFAN
NPRELKAFLEHMIEVDSCSPQGVYDTLLELRLQDWAHEQDPERKRVLQGEAVSLLRSDNT
VFDKALVLCQMHNFKEGILYLYEKGKLYQQIMHYHMQNEEYGKVIEACKRYGDQEGCLWE
QALGYFARKEEDCKAYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQR
ESQQIEDDERKIRQYREETANLRSEIQELKMSAKIFQKTKCNMCNSPLELPSVHFLCSHS
FHQHCFESYAESEAECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADY
FGRGVFNKLTLVTDLPGSKTVGNLEVNLQKDLLIHTKRNC
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgacaacgccctgttgtagctgcagtgctaacgccaacaaaatggcagcgttcttacag
tggaggaaatttgtcttctttgataaagacacggtaaaggatccggtggatactgggaaa
aacttcgctctcccgagcggcatatcggcctgtgactctggtcggggtcatattgtactg
ggagatatggatggcaggatctggcttttgacacgctccctgcagttgacatcttttcag
gcttacaagttgcgtgtaacccacctttaccagctgaagcagcacagcatacttgtgtca
gtggggcaggacgaacacggaataaatcctctagtaaaggtctggaacctcgacaaaagg
gacagtggaaatcctctctgcactaggattttccctgccattcctggcaacaaaccaact
gaagtgtcttgcctctgtgtacatgaaaacctcaacttcatggccattggcttcacagat
ggcagtgtggttttgaccaaaggtgacatcaccagagatcgtcacagtaaaactctgacc
ttgcacgagggagccagccctgtcactggcctcgcattccgccaagtggcaaaggtcaca
catctgtttgttgccactctggagaaagttcattgctacacgctgtccatcaaggagtat
cctaaagtagagctggatacacacggatgtgcactgtgctgctcctccttggcagatcct
tcccaggattcccagttcattgtagctggtgatgaatgcgtgtacctgtaccaacctgat
gaacgtgggccttgctttgcctttgaaggacacaagctgttggtccattggcaccgtgga
tatctgtttttactcatcagggacgcaaagtcaccgaacaagacagagtttggcagcagg
gagagctttccatctgacagacagattctgaccatctacgatctggacaacaagttcatc
gcttacagtgccgcttttgacgatgtcattgatgtggtggcagagtggggctccttctac
atcctgaccagagatggtaaaatgtttgttcttcaggagaaagacacacagaccaaactg
gaaatgctgtttaagaagaatctgtttgtgatggcgataaacctggctaagagccagcac
ttggacagtgacggactgtctgagatcttcagacagtatggtgatcacctttacctgaag
ggagatcatgatggtgccatccagcagtacattcgcaccattgggaaactggagccatct
tacgtcatcaggaaatttctggacgctcagaggatccacaacctaacagcatatctgcaa
gccctgcacaggcagtcactcgccaatgcggaccataccacactactgctgaactgttac
accaagctgaaggacagctccaagctggaagagttcattaagagcagtgaaagtgaagtc
cactttgatgttgagatcgccatcaaggttcttcgacaggccggctaccacagccatgct
gtttttttggctgaaaaacacatgcaccatgaatggtacctaaaaatccagctggaagac
ctcaagaactatcaggaagggctgcgttacatcggacgtctgcctttcgaacaatctgag
agcaacatgaaacgttacggcaagacactgatgcaccatgtccctgaaggtaccacactt
ctcctgaagggtttatgcaccaactacttacccagcagagacactgctgaaaaagagtgc
ctggatagggttcagatcaataaggccaactctgaagaattcatcccaatttttgccaac
aacccacgggagctgaaagccttcttggaacacatgattgaggtggactcttgttctcct
cagggtgtatatgacacactgctggagctccggctgcaagactgggcacatgaacaggac
cctgagagaaaaagggtcctgcagggcgaggctgtgtccctgttgagaagtgacaacact
gtgtttgataaggccctggttctttgccagatgcacaacttcaaagaaggcattctctac
ctttatgagaaaggcaaactgtaccaacagataatgcattaccacatgcagaatgaggaa
tatggtaaagtgatagaggcctgcaagcgctatggggaccaagagggttgtctttgggag
caggcactgggatactttgccagaaaagaagaggactgcaaggcctacatcagtgaggtc
ctacatcacattgaccaaaacaacctcatgcctccattacttgtggtgcagacactggca
cacaactcgacagccactctctccgtcatcaaggactacctcatcaacaagctgcagagg
gagagccagcagattgaggatgatgaacgcaaaattcgccagtaccgcgaagaaactgcc
aatctccgctctgagatccaggagctcaaaatgagtgccaagatattccagaagaccaag
tgtaacatgtgcaacagccccctggagttgccatcagttcatttcctgtgcagccactcc
ttccatcaacactgctttgaaagttatgctgagagtgaggctgagtgcccaacttgcact
ccagagaaccgcaaagtcatggacatgctgcgtgcacaggaccagaaacgggacctgcat
gatcacttcaacagacagttacgcagttcgaatgatggcttctctgtcgtggctgactat
tttggtcgaggagtgtttaacaaactgactctggtcactgacctgcctggcagcaaaact
gttggaaatctagaagttaacctgcagaaagaccttctaatccacaccaagagaaactgc
tag

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